Factsheet for PGSC0003DMT400076103

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g074300.2.1	Tomato	nucleus	87.36	89.15
Bra032095.1-P	Field mustard	nucleus	53.16	58.36
AT2G24430.1	Thale cress	nucleus	52.59	57.91
Bra007855.1-P	Field mustard	nucleus	52.59	57.73
CDX76817	Canola	nucleus	52.59	57.73
CDY20314	Canola	nucleus	52.59	57.73
CDY34773	Canola	nucleus	52.59	57.73
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	36.49	54.98
VIT_04s0008g02710.t01	Wine grape	nucleus	48.85	52.31
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	48.85	47.89
KRH61984	Soybean	nucleus	48.85	47.62
PGSC0003DMT400074048	Potato	nucleus	39.08	44.59
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	47.13	43.97
Os09t0497900-01	Rice	cytosol	42.82	42.33
GSMUA_Achr8P24680_001	Banana	cytosol	38.22	41.96
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	39.37	41.9
PGSC0003DMT400003380	Potato	nucleus	38.51	41.49
PGSC0003DMT400050262	Potato	nucleus	39.08	40.96
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	42.82	40.93
TraesCS5A01G275900.1	Wheat	nucleus	43.1	40.87
PGSC0003DMT400083083	Potato	cytosol	39.37	40.77
PGSC0003DMT400013753	Potato	nucleus	39.08	40.6
TraesCS5B01G275200.1	Wheat	nucleus	42.82	40.49
HORVU5Hr1G074810.1	Barley	nucleus	41.95	40.22
EER99125	Sorghum	nucleus	42.82	39.63
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	41.67	38.56
Zm00001d006053_P001	Maize	nucleus	42.24	37.89
PGSC0003DMT400032280	Potato	nucleus	27.59	33.45
PGSC0003DMT400025690	Potato	nucleus	33.91	33.24
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	26.15	32.85
PGSC0003DMT400065559	Potato	nucleus	25.29	31.21
PGSC0003DMT400051915	Potato	cytosol	25.29	30.99
PGSC0003DMT400056916	Potato	nucleus	30.17	30.09
PGSC0003DMT400038464	Potato	nucleus	59.48	27.13

Protein Annotations

EntrezGene:102586730	MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:M1CW69	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
EnsemblPlantsGene:PGSC0003DMG400029593	PGSC:PGSC0003DMG400029593	EnsemblPlants:PGSC0003DMT400076103	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF50
SUPFAM:SSF101941	UniParc:UPI0002969390	RefSeq:XP_006355216.1	SEG:seg	:	:

Description

Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400029593]

Coordinates

chr8:-:45162439..45166375

Molecular Weight (calculated)

39301.1 Da

IEP (calculated)

7.843

GRAVY (calculated)

-0.800

Length

348 amino acids

Sequence
(BLAST)

001: MEGEVKEELD LPPGFRFHPS DEELITYYLM NKISDSNNFI ARAIGDVDLN KSEPWDLPGK AKMGEKEWYF FSLRDRKYPT GVRTNRATNS GYWKTTGKDR
101: EIFSNSELVG MKKTLVFYKG RAPRGEKTNW VMHEYRDHSK SSYRTHKQHE WVVCRVFQKS NAGGKKYPSN NNTSRIHVNP YTTLDQINPN TICISSQMMM
201: PQAHEHNANQ LAMGRPSSSS SSAYNMINHP EIQEFNRVFQ GVSTSSSSNM MNLHPILQSQ MNYNLGGGNG FTISGLNLNL GGGGATTSQL VPPPPPPPQD
301: MSSSSHVMMT THDDQAGYGE NMSSGHAMNR FMVMENSAHD LDNYWANY

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.