Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 90.36 | 90.11 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 90.36 | 89.37 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 89.81 | 88.59 |
| Os09t0497900-01 | Rice | cytosol | 71.35 | 73.58 |
| EER99125 | Sorghum | nucleus | 68.59 | 66.22 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 66.67 | 64.36 |
| Zm00001d006053_P001 | Maize | nucleus | 68.04 | 63.66 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 38.57 | 60.61 |
| VIT_04s0008g02710.t01 | Wine grape | nucleus | 49.59 | 55.38 |
| KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 51.52 | 52.68 |
| KRH61984 | Soybean | nucleus | 50.14 | 50.98 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 51.52 | 50.13 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 29.48 | 49.31 |
| AT2G24430.1 | Thale cress | nucleus | 41.32 | 47.47 |
| Bra032095.1-P | Field mustard | nucleus | 41.32 | 47.32 |
| CDY34773 | Canola | nucleus | 40.77 | 46.69 |
| CDY20314 | Canola | nucleus | 40.77 | 46.69 |
| Bra007855.1-P | Field mustard | nucleus | 40.5 | 46.37 |
| CDX76817 | Canola | nucleus | 40.5 | 46.37 |
| Solyc08g006020.2.1 | Tomato | nucleus | 38.57 | 46.36 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 19.28 | 46.05 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 37.47 | 45.48 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 40.77 | 45.26 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 28.93 | 44.68 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 37.74 | 43.22 |
| PGSC0003DMT400076103 | Potato | nucleus | 40.22 | 41.95 |
| Solyc08g074300.2.1 | Tomato | nucleus | 38.57 | 41.06 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 34.99 | 35.88 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 33.88 | 35.55 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 33.06 | 34.68 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 35.26 | 34.59 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 28.37 | 33.55 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 25.62 | 32.98 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.13 | 32.29 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 33.06 | 31.83 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 33.33 | 31.59 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 33.88 | 31.38 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 25.34 | 31.19 |
| HORVU2Hr1G080460.8 | Barley | plastid | 34.99 | 31.05 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 26.45 | 30.87 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 33.61 | 30.73 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 27.27 | 29.03 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 33.33 | 28.47 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 28.1 | 28.1 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 33.61 | 26.81 |
| PGSC0003DMT400038464 | Potato | nucleus | 39.94 | 19.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287RTT3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU5Hr1G074810 | EnsemblPlants:HORVU5Hr1G074810.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI000B46BF37 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:544958550..544961464
Molecular Weight (calculated)
39341.5 Da
IEP (calculated)
9.292
GRAVY (calculated)
-0.621
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSGGGAEA ASKKKKSSKE GEEESLPPGF RFHPTDEELI TYYLRGKIAD AGFTARAITE VDLNKCEPWD LPEKAKMGEK EWYFFSLRDR KYPTGVRTNR
101: ATNAGYWKTT GKDKEIFTGQ PPSAQELVGM KKTLVFYKGR APRGEKSNWV MHEYRLHLKP TSKSNKDEWV VCRIFAKSPG VKKYPSSTSR SHHHHHPYTL
201: DMVPQFLPTL LGHGDLFGGR GHHHSYMAPA DLAELSRFAR GTPGLHPHIQ PHPSSVSGSG YLNPFALSSL NLNLGGPSPQ HALQHAMSLP MGGQQQAGGA
301: GGQAMTMEQH MAAGLAGCVG IAAAGGDGGF GGEGHAAGAG GAGVRYPNLD VDQMVERYWP GSY
101: ATNAGYWKTT GKDKEIFTGQ PPSAQELVGM KKTLVFYKGR APRGEKSNWV MHEYRLHLKP TSKSNKDEWV VCRIFAKSPG VKKYPSSTSR SHHHHHPYTL
201: DMVPQFLPTL LGHGDLFGGR GHHHSYMAPA DLAELSRFAR GTPGLHPHIQ PHPSSVSGSG YLNPFALSSL NLNLGGPSPQ HALQHAMSLP MGGQQQAGGA
301: GGQAMTMEQH MAAGLAGCVG IAAAGGDGGF GGEGHAAGAG GAGVRYPNLD VDQMVERYWP GSY
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.