Factsheet for VIT_04s0008g02710.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61984	Soybean	nucleus	72.0	65.55
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	70.46	64.51
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	69.54	60.59
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	41.54	58.44
Os09t0497900-01	Rice	cytosol	56.31	51.99
Bra032095.1-P	Field mustard	nucleus	49.85	51.1
AT2G24430.1	Thale cress	nucleus	49.54	50.95
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	56.92	50.82
Bra007855.1-P	Field mustard	nucleus	49.23	50.47
CDY34773	Canola	nucleus	49.23	50.47
CDY20314	Canola	nucleus	49.23	50.47
CDX76817	Canola	nucleus	49.23	50.47
TraesCS5A01G275900.1	Wheat	nucleus	56.62	50.14
TraesCS5B01G275200.1	Wheat	nucleus	56.62	50.0
HORVU5Hr1G074810.1	Barley	nucleus	55.38	49.59
Solyc08g006020.2.1	Tomato	nucleus	45.54	49.01
PGSC0003DMT400076103	Potato	nucleus	52.31	48.85
EER99125	Sorghum	nucleus	55.08	47.61
Solyc08g074300.2.1	Tomato	nucleus	49.54	47.21
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	47.38	47.09
Zm00001d006053_P001	Maize	nucleus	54.77	45.88
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	52.92	45.74
GSMUA_Achr8P24680_001	Banana	cytosol	44.0	45.11
VIT_17s0000g03660.t01	Wine grape	nucleus	43.69	43.43
VIT_19s0014g02200.t01	Wine grape	nucleus	44.31	39.67
VIT_17s0000g06400.t01	Wine grape	nucleus	41.23	37.22
VIT_19s0027g00230.t01	Wine grape	nucleus	30.15	33.22
VIT_18s0122g00800.t01	Wine grape	nucleus	41.54	31.76
VIT_08s0007g07640.t01	Wine grape	nucleus	39.38	31.76
VIT_14s0108g01070.t01	Wine grape	nucleus	39.08	30.17
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	21.85	28.98
PGSC0003DMT400038464	Potato	nucleus	48.0	20.45

Protein Annotations

EntrezGene:100259270	wikigene:100259270	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CBI20789	ProteinID:CBI20789.3
UniProt:D7SU40	EMBL:FN595231	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	EntrezGene:LOC100259270	wikigene:LOC100259270	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941	UniParc:UPI00015C8346	ArrayExpress:VIT_04s0008g02710
EnsemblPlantsGene:VIT_04s0008g02710	EnsemblPlants:VIT_04s0008g02710.t01	RefSeq:XP_002280812	RefSeq:XP_002280812.1	RefSeq:XP_010648442.1	RefSeq:XP_019074708.1

Description

No Description!

Coordinates

chr4:+:2251198..2253524

Molecular Weight (calculated)

36577.4 Da

IEP (calculated)

8.653

GRAVY (calculated)

-0.666

Length

325 amino acids

Sequence
(BLAST)

001: MEEERKEETL PPGFRFHPTD EELITCYLIN KISDATFTGR AIADVDLNKC EPWELPGKAK MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI
101: FNSVTSELVG MKKTLVFYRG RAPRGEKTNW VMHEYRIHSK SAFRTSKDEW VVCRVFQKSA AGKKYPSNQS RGMNPYSLDI GPSVMPPPML QADSSQFPMG
201: RNYVSNAELA ELTRVLRGGS TGGLNLPIQS QLNYPLGGGC FTISGLNLNL GGTSTQPVLR PNSLPQPMQM NQQDHMMTSP MLTSGSIPTD QTGYGAEVNN
301: GNGHNSRFMN MVDHCVDLDN YWPPY

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.