Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61984 | Soybean | nucleus | 93.8 | 93.28 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 75.49 | 71.85 |
| VIT_04s0008g02710.t01 | Wine grape | nucleus | 64.51 | 70.46 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 36.62 | 56.28 |
| Os09t0497900-01 | Rice | cytosol | 52.96 | 53.41 |
| TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 53.24 | 51.92 |
| AT2G24430.1 | Thale cress | nucleus | 45.92 | 51.58 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 52.68 | 51.52 |
| Bra032095.1-P | Field mustard | nucleus | 45.92 | 51.42 |
| CDY20314 | Canola | nucleus | 45.63 | 51.1 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 52.96 | 51.09 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 52.68 | 50.95 |
| Solyc08g006020.2.1 | Tomato | nucleus | 42.82 | 50.33 |
| CDY34773 | Canola | nucleus | 44.79 | 50.16 |
| CDX76817 | Canola | nucleus | 44.79 | 50.16 |
| EER99125 | Sorghum | nucleus | 52.96 | 50.0 |
| Bra007855.1-P | Field mustard | nucleus | 44.51 | 49.84 |
| Zm00001d006053_P001 | Maize | nucleus | 54.08 | 49.48 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 52.11 | 49.2 |
| PGSC0003DMT400076103 | Potato | nucleus | 47.89 | 48.85 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 43.94 | 47.71 |
| Solyc08g074300.2.1 | Tomato | nucleus | 45.35 | 47.21 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 39.44 | 44.16 |
| KRH48487 | Soybean | nucleus | 40.28 | 44.14 |
| KRH41635 | Soybean | nucleus | 38.31 | 43.45 |
| KRH39185 | Soybean | nucleus | 39.72 | 42.6 |
| KRH60340 | Soybean | nucleus | 38.03 | 42.06 |
| KRH22042 | Soybean | nucleus | 39.44 | 39.77 |
| KRH27280 | Soybean | nucleus | 38.31 | 39.65 |
| KRH26232 | Soybean | nucleus | 40.0 | 38.8 |
| KRH03497 | Soybean | nucleus | 36.9 | 37.43 |
| KRH56898 | Soybean | nucleus | 36.9 | 37.43 |
| KRH55187 | Soybean | nucleus | 38.87 | 36.8 |
| KRH40061 | Soybean | nucleus | 36.06 | 35.26 |
| KRH18465 | Soybean | nucleus | 34.93 | 34.64 |
| KRG93561 | Soybean | nucleus | 35.21 | 34.53 |
| KRH54575 | Soybean | nucleus | 34.65 | 34.45 |
| KRH60880 | Soybean | nucleus | 33.8 | 34.29 |
| KRH63309 | Soybean | nucleus | 33.8 | 33.61 |
| KRH51562 | Soybean | nucleus | 34.08 | 32.35 |
| KRH01200 | Soybean | mitochondrion, nucleus | 34.93 | 31.96 |
| KRH06738 | Soybean | nucleus | 36.62 | 31.94 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 26.48 | 31.76 |
| KRH13649 | Soybean | nucleus | 27.04 | 31.68 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 26.2 | 31.63 |
| KRG94783 | Soybean | nucleus | 36.06 | 31.6 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 26.2 | 31.42 |
| KRH43817 | Soybean | nucleus | 26.48 | 31.13 |
| KRH70130 | Soybean | nucleus | 33.8 | 29.27 |
| KRH08479 | Soybean | nucleus | 33.52 | 29.02 |
| PGSC0003DMT400038464 | Potato | nucleus | 44.79 | 20.84 |
Protein Annotations
| EntrezGene:100804931 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02003425 | EnsemblPlantsGene:GLYMA_06G080200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1K975 | InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KRH52643 |
| ProteinID:KRH52643 | ProteinID:KRH52643.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI000295607D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:6157237..6159622
Molecular Weight (calculated)
39578.9 Da
IEP (calculated)
8.534
GRAVY (calculated)
-0.621
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKEKEAIVK EGTTEIEMEG TRAKEETLPP GFRFHPTDEE LVTCYLVNKI SDSNFTGRAI TDVDLNKCEP WELPGKAKMG EKEWYFFSLR DRKYPTGVRT
101: NRATNAGYWK TTGKDKEIFN SETSELIGMK KTLVFYKGRA PRGEKSNWVM HEYRIHSKSS YRTNRQDEWV VCRVFKKSGN AKKYPSSNHA RAVNPYSLEI
201: EPNILPPLMM QLGDPGAHFL YGRNYMNSAE LAELARVLRG GGSTSSVNLP IQSHLSYPTS SSTGGGFTIS GLNLNLGGGG ATATTQPILR PMQPSPAPVH
301: TMAQVLDANS SMMTTSSLGA ENVGYGAEMS NLNLHGNRYM GVDHCMDLDN YWPSY
101: NRATNAGYWK TTGKDKEIFN SETSELIGMK KTLVFYKGRA PRGEKSNWVM HEYRIHSKSS YRTNRQDEWV VCRVFKKSGN AKKYPSSNHA RAVNPYSLEI
201: EPNILPPLMM QLGDPGAHFL YGRNYMNSAE LAELARVLRG GGSTSSVNLP IQSHLSYPTS SSTGGGFTIS GLNLNLGGGG ATATTQPILR PMQPSPAPVH
301: TMAQVLDANS SMMTTSSLGA ENVGYGAEMS NLNLHGNRYM GVDHCMDLDN YWPSY
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.