CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54575	Soybean	nucleus	91.32	91.32
KRH03497	Soybean	nucleus	69.47	70.86
KRH56898	Soybean	nucleus	69.19	70.57
VIT_17s0000g06400.t01	Wine grape	nucleus	66.39	65.83
KRH40061	Soybean	nucleus	44.82	44.08
KRH41635	Soybean	nucleus	36.97	42.17
KRH48487	Soybean	nucleus	37.53	41.36
KRH18465	Soybean	nucleus	41.46	41.34
KRH22042	Soybean	nucleus	40.62	41.19
KRH27280	Soybean	nucleus	39.5	41.11
KRH60340	Soybean	nucleus	36.69	40.81
KRH01200	Soybean	mitochondrion, nucleus	43.7	40.21
KRG93561	Soybean	nucleus	40.62	40.06
KRH39185	Soybean	nucleus	36.69	39.58
KRH13649	Soybean	nucleus	33.33	39.27
KRG94783	Soybean	nucleus	43.98	38.77
KRH43817	Soybean	nucleus	32.49	38.41
KRH06738	Soybean	nucleus	43.7	38.33
KRH08479	Soybean	nucleus	43.14	37.56
KRH26232	Soybean	nucleus	38.1	37.16
KRH60880	Soybean	nucleus	35.85	36.57
KRH70130	Soybean	nucleus	41.74	36.34
KRH55187	Soybean	nucleus	37.53	35.73
KRH61984	Soybean	nucleus	34.73	34.73
KRH51562	Soybean	nucleus	35.85	34.22
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	33.61	33.8
KRH32193	Soybean	cytosol, nucleus, plastid	27.73	33.45
KRH67403	Soybean	cytosol, nucleus, plastid	27.73	33.45
KRG95684	Soybean	cytosol, nucleus, peroxisome	27.17	32.99
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	34.17	32.71

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02002664	EnsemblPlantsGene:GLYMA_04G167200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	UniProt:I1JWT3	InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KRH63309	ProteinID:KRH63309
ProteinID:KRH63309.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744
PANTHER:PTHR31744:SF7	SUPFAM:SSF101941	UniParc:UPI00023BF251	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:41938604..41940695

Molecular Weight (calculated)

40476.6 Da

IEP (calculated)

8.762

GRAVY (calculated)

-0.643

Length

357 amino acids

Sequence
(BLAST)

001: MENVSVLLCN KEKDQMDLPP GFRFHPTDEE LISHYLYRKV THTNFSARAI GEVDLNRSEP WDLPWKAKMG EKEWYFFCVR DRKYPTGLRT NRATQSGYWK
101: ATGKDKEIFR GKSLVGMKKT LVFYKGRAPK GEKTDWVMHE YRLDGKFSVH NLPKTAKNEW VICRVFQKSS GVKRTHISGM MMLDSYGNEL GYSSSALPPL
201: TDSSPSIDNT KVLSVTDTAY VPCFSNPIDA PRGIFDSLNN INITTTTTTN NNNTLYGVSS NHSFYNTQLH IPPTLPLPSS SNHYLRAFLE NQGNGSNMRN
301: NGYETEREMV SVSQETTIST DVNAEISSLG KRQFENQQNP TASSAVVPMD VATLWNY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.