Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60880 | Soybean | nucleus | 85.29 | 91.14 |
| Bra008259.1-P | Field mustard | cytosol | 39.84 | 46.56 |
| CDY45986 | Canola | cytosol | 39.84 | 46.56 |
| CDY20411 | Canola | cytosol | 39.84 | 46.42 |
| AT1G76420.1 | Thale cress | cytosol | 41.44 | 46.41 |
| Bra015750.1-P | Field mustard | cytosol | 41.44 | 46.27 |
| CDX87602 | Canola | cytosol | 41.44 | 46.27 |
| CDX88273 | Canola | cytosol | 41.44 | 45.99 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 37.7 | 44.48 |
| PGSC0003DMT400025690 | Potato | nucleus | 41.18 | 43.38 |
| Os08t0511200-00 | Rice | cytosol | 37.43 | 40.35 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 36.1 | 40.3 |
| EES14261 | Sorghum | nucleus | 36.63 | 40.18 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 35.83 | 40.12 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 36.1 | 40.06 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 43.85 | 38.59 |
| KRH48487 | Soybean | nucleus | 32.62 | 37.65 |
| KRH56898 | Soybean | nucleus | 34.76 | 37.14 |
| KRH41635 | Soybean | nucleus | 31.02 | 37.06 |
| KRH27280 | Soybean | nucleus | 33.96 | 37.03 |
| KRH03497 | Soybean | nucleus | 34.49 | 36.86 |
| KRH60340 | Soybean | nucleus | 31.28 | 36.45 |
| KRH22042 | Soybean | nucleus | 34.22 | 36.36 |
| KRH13649 | Soybean | nucleus | 29.14 | 35.97 |
| KRH39185 | Soybean | nucleus | 31.82 | 35.95 |
| KRH63309 | Soybean | nucleus | 34.22 | 35.85 |
| KRH54575 | Soybean | nucleus | 34.22 | 35.85 |
| KRH43817 | Soybean | nucleus | 28.88 | 35.76 |
| KRH40061 | Soybean | nucleus | 34.22 | 35.26 |
| KRH61984 | Soybean | nucleus | 32.89 | 34.45 |
| KRH18465 | Soybean | nucleus | 32.89 | 34.36 |
| KRH26232 | Soybean | nucleus | 33.42 | 34.15 |
| KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 32.35 | 34.08 |
| KRG93561 | Soybean | nucleus | 32.89 | 33.98 |
| KRH55187 | Soybean | nucleus | 33.42 | 33.33 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 33.16 | 33.24 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 25.94 | 32.77 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 25.67 | 32.65 |
| Zm00001d031463_P002 | Maize | mitochondrion | 36.36 | 32.23 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 24.87 | 31.42 |
| KRH01200 | Soybean | mitochondrion, nucleus | 32.09 | 30.93 |
| KRG94783 | Soybean | nucleus | 33.42 | 30.86 |
| KRH06738 | Soybean | nucleus | 33.16 | 30.47 |
| KRH70130 | Soybean | nucleus | 32.89 | 30.0 |
| KRH08479 | Soybean | nucleus | 32.62 | 29.76 |
Protein Annotations
| EntrezGene:100780313 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02003380 | EnsemblPlantsGene:GLYMA_06G014900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K7KSH7 | EnsemblPlants:KRH51562 |
| ProteinID:KRH51562 | ProteinID:KRH51562.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI000233976A | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:1116201..1118815
Molecular Weight (calculated)
42778.2 Da
IEP (calculated)
7.332
GRAVY (calculated)
-0.666
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAMEELLYE LSDHERRNEQ GLPPGFRFHP TDEELVTFYL ASKVFNGTFS NVKFAEVDLN RCEPWELPDV AKMGEREWYL FSLRDRKYPT GLRTNRATGA
101: GYWKATGKDK EVYSASSGTL LGMKKTLVFY KGRAPRGEKT KWVMHEYRLV LDAHFSLPHT HPSKEEWVIC RIFHKSGEKR SPVLQVHGHS DASSSPRESA
201: LPPLLASPSC FTFDPESQSQ SSSHSQRDFQ SPVLIHHQDQ NGHSHNPRLF PLEITNARNH PSSFSDLFFK PLQQNCTLKT NEQTILPKVT KTEDATFYDQ
301: YHQLLDDHNN MRWVNKLNQN PSNLLNTFPF EVDAGLMAFS GAANAQVKDI STSTPFNRVG LQQTLDSWPL AQHV
101: GYWKATGKDK EVYSASSGTL LGMKKTLVFY KGRAPRGEKT KWVMHEYRLV LDAHFSLPHT HPSKEEWVIC RIFHKSGEKR SPVLQVHGHS DASSSPRESA
201: LPPLLASPSC FTFDPESQSQ SSSHSQRDFQ SPVLIHHQDQ NGHSHNPRLF PLEITNARNH PSSFSDLFFK PLQQNCTLKT NEQTILPKVT KTEDATFYDQ
301: YHQLLDDHNN MRWVNKLNQN PSNLLNTFPF EVDAGLMAFS GAANAQVKDI STSTPFNRVG LQQTLDSWPL AQHV
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.