Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P00570_001 | Banana | nucleus | 26.18 | 49.4 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 35.02 | 48.05 |
| EES14261 | Sorghum | nucleus | 50.16 | 46.63 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 48.9 | 46.41 |
| GSMUA_Achr10P... | Banana | cytosol | 33.12 | 46.05 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 48.58 | 45.97 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 48.58 | 45.7 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 35.33 | 45.53 |
| Os08t0511200-00 | Rice | cytosol | 48.9 | 44.67 |
| PGSC0003DMT400025690 | Potato | nucleus | 49.53 | 44.23 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 58.36 | 43.53 |
| Bra008259.1-P | Field mustard | cytosol | 43.22 | 42.81 |
| CDY45986 | Canola | cytosol | 42.9 | 42.5 |
| CDY20411 | Canola | cytosol | 42.9 | 42.37 |
| CDX88273 | Canola | cytosol | 43.53 | 40.95 |
| CDX87602 | Canola | cytosol | 42.9 | 40.6 |
| Bra015750.1-P | Field mustard | cytosol | 42.9 | 40.6 |
| AT1G76420.1 | Thale cress | cytosol | 41.96 | 39.82 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 29.65 | 39.0 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 35.33 | 38.89 |
| KRH60880 | Soybean | nucleus | 42.9 | 38.86 |
| KRH51562 | Soybean | nucleus | 44.48 | 37.7 |
| Zm00001d031463_P002 | Maize | mitochondrion | 49.84 | 37.44 |
| GSMUA_Achr11P... | Banana | nucleus | 30.91 | 37.4 |
| GSMUA_Achr10P... | Banana | nucleus | 39.12 | 37.35 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 35.33 | 36.6 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 33.75 | 36.52 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 31.86 | 36.46 |
| GSMUA_Achr10P... | Banana | cytosol | 40.69 | 36.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.12 | 36.21 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 31.55 | 35.97 |
| GSMUA_Achr11P... | Banana | nucleus | 31.55 | 35.84 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 33.75 | 35.79 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 34.7 | 35.71 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 31.55 | 35.71 |
| GSMUA_Achr11P... | Banana | nucleus | 31.23 | 35.61 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 30.6 | 35.53 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 32.49 | 35.4 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 30.28 | 35.16 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 35.96 | 35.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.39 | 35.02 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 31.23 | 34.98 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 32.81 | 34.9 |
| GSMUA_Achr10P... | Banana | nucleus | 35.96 | 34.76 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 31.23 | 34.74 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 29.65 | 34.31 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 34.38 | 34.28 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 35.33 | 34.25 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 35.65 | 34.04 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 33.75 | 33.97 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 33.75 | 33.75 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 35.96 | 32.85 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 30.91 | 32.56 |
| GSMUA_Achr7P11500_001 | Banana | nucleus | 33.75 | 31.47 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 33.75 | 30.92 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 35.96 | 22.09 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G20090_001 |
| EnsemblPlants:GSMUA_Achr9P20090_001 | EnsemblPlants:GSMUA_Achr9T20090_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0U1W8 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF49 | SUPFAM:SSF101941 |
| UniParc:UPI0002965EC6 | SEG:seg | : | : | : | : |
Description
CUP-SHAPED COTYLEDON3, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G20090_001]
Coordinates
chr9:+:23157105..23158953
Molecular Weight (calculated)
35962.5 Da
IEP (calculated)
5.232
GRAVY (calculated)
-0.462
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEVLWEL IGDDVSEQGL PPGFRFHPTD EELVTFYLAS KVFNGGFCGV DIVEVDLNRC EPWELPEVAK IGEREWYFFS LRDRKYPTGL RTNRATGAGY
101: WKATGKDREV HSATSGALVG MKKTLVFYKG RAPRGEKTKW VLHEYRLDGE YYCRLACKEE WVMCRIFHKS AGDHRKSQYY PNHAFLLDPS SSSNPCFPSF
201: LDLPHLQDPI HSLLQSGKLP PFNFYQEPNS LFPLLPLPST TTTLPSLHET RCSSNDDRSF QPPQQEETGI PSWLDPYLQN PLLYEMGLPP LGLGGVVHHD
301: LTFMDETAAG ESGPLVS
101: WKATGKDREV HSATSGALVG MKKTLVFYKG RAPRGEKTKW VLHEYRLDGE YYCRLACKEE WVMCRIFHKS AGDHRKSQYY PNHAFLLDPS SSSNPCFPSF
201: LDLPHLQDPI HSLLQSGKLP PFNFYQEPNS LFPLLPLPST TTTLPSLHET RCSSNDDRSF QPPQQEETGI PSWLDPYLQN PLLYEMGLPP LGLGGVVHHD
301: LTFMDETAAG ESGPLVS
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.