Factsheet for GSMUA_Achr10P22350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	54.65	58.43
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	35.21	54.11
GSMUA_Achr9P00570_001	Banana	nucleus	24.79	52.38
GSMUA_Achr5P07600_001	Banana	cytosol	35.21	50.81
Zm00001d035266_P001	Maize	nucleus	49.86	49.58
Os06t0344900-00	Rice	cytosol, nucleus, plastid	50.14	47.72
GSMUA_Achr10P...	Banana	cytosol	30.14	46.93
GSMUA_Achr8P18420_001	Banana	nucleus	36.9	45.49
TraesCS7D01G342300.1	Wheat	nucleus	45.07	44.2
TraesCS7B01G246300.1	Wheat	nucleus	45.07	44.2
TraesCS7A01G334800.1	Wheat	nucleus	45.07	44.08
Zm00001d041791_P001	Maize	nucleus	45.63	44.02
GSMUA_Achr10P...	Banana	nucleus	40.56	43.9
GSMUA_Achr7P18330_001	Banana	nucleus	36.62	42.21
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	38.59	42.15
GSMUA_Achr9P16920_001	Banana	cytosol	36.06	41.83
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	38.03	41.28
GSMUA_Achr9P27530_001	Banana	nucleus	38.59	41.27
GSMUA_Achr9P20090_001	Banana	cytosol	36.34	40.69
HORVU7Hr1G082420.2	Barley	nucleus	44.79	40.56
GSMUA_Achr3P18020_001	Banana	nucleus	33.24	40.27
GSMUA_Achr8P24680_001	Banana	cytosol	35.77	40.06
GSMUA_Achr11P...	Banana	nucleus	29.01	39.31
KXG23228	Sorghum	plastid	49.01	39.19
GSMUA_Achr11P...	Banana	nucleus	30.42	38.71
GSMUA_Achr9P10210_001	Banana	nucleus	26.2	38.59
GSMUA_Achr8P33310_001	Banana	nucleus	30.7	38.52
GSMUA_Achr3P23360_001	Banana	nucleus	29.86	37.86
GSMUA_Achr3P09520_001	Banana	cytosol	33.8	37.74
GSMUA_Achr6P30050_001	Banana	nucleus	30.14	37.54
GSMUA_Achr6P08600_001	Banana	nucleus	36.62	37.46
GSMUA_Achr6P36550_001	Banana	nucleus	29.3	37.41
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	29.01	37.18
GSMUA_Achr5P18670_001	Banana	nucleus	27.89	36.26
GSMUA_Achr8P18980_001	Banana	nucleus	27.89	36.26
GSMUA_Achr7P11500_001	Banana	nucleus	34.65	36.18
GSMUA_Achr5P00500_001	Banana	nucleus	27.89	36.13
GSMUA_AchrUn_...	Banana	nucleus	25.92	35.8
GSMUA_Achr11P...	Banana	nucleus	27.89	35.61
GSMUA_Achr6P32290_001	Banana	nucleus	34.37	35.26
GSMUA_Achr5P26640_001	Banana	nucleus	29.58	35.12
GSMUA_Achr6P31350_001	Banana	nucleus	29.3	34.9
GSMUA_Achr9P26140_001	Banana	cytosol	30.7	34.6
GSMUA_AchrUn_...	Banana	nucleus	28.17	34.48
GSMUA_Achr8P07120_001	Banana	nucleus	28.45	33.55
GSMUA_Achr1P10860_001	Banana	nucleus	27.04	32.99
GSMUA_Achr8P21470_001	Banana	nucleus	40.0	27.52

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010014	GO:GO:0010223
GO:GO:0051782	GO:GO:0090691	EnsemblPlantsGene:GSMUA_Achr10G22350_001	EnsemblPlants:GSMUA_Achr10P22350_001	EnsemblPlants:GSMUA_Achr10T22350_001	InterPro:IPR003441
InterPro:IPR036093	UniProt:M0RKG0	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF22	SUPFAM:SSF101941	UniParc:UPI000295CC50	SEG:seg	:

Description

Protein CUP-SHAPED COTYLEDON 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22350_001]

Coordinates

chr10:-:27580997..27582707

Molecular Weight (calculated)

38458.5 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.426

Length

355 amino acids

Sequence
(BLAST)

001: MENYGRHFDN NEAQLPPGFR FHPTDEELIT YYLLKKVLDS SFTGRAIAEI DLNKCEPWEL PDKAKMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKATG
101: KDREIYSSKT MSLVGMKKTL VFYKGRAPKG EKSNWVMHEY RLEGKFAYHF LSRSSKDEWV VSRVFQKCGG GGGGGSGKKT RLALAGSHFS NSGNTGGGGG
201: CGSTSSSTLP PLLEPTPLPF SAGLKAPDRE SCSYDSTDRE PVPCFSTAAA AATGLGLHIP PPPQGPAIFG PTGAFPCLRS LHENLQLPFF LSGMAAQPVY
301: AGPSPAVVVD AGIGTRSEGA GWPSDLDRKA EAAAAVVRAH PMPVGSTELD CLWTF

Best Arabidopsis Sequence Match ( AT5G53950.1 )
(BLAST)

001: MDIPYYHYDH GGDSQYLPPG FRFHPTDEEL ITHYLLRKVL DGCFSSRAIA EVDLNKCEPW QLPGRAKMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY

Arabidopsis Description

NAC098Protein CUP-SHAPED COTYLEDON 2 [Source:UniProtKB/Swiss-Prot;Acc:O04017]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.