Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P07600_001 | Banana | cytosol | 45.66 | 64.23 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 56.36 | 63.73 |
| GSMUA_Achr10P... | Banana | cytosol | 41.91 | 63.6 |
| CDY29982 | Canola | cytosol | 31.21 | 62.79 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 62.72 | 62.54 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 53.18 | 59.74 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 53.18 | 57.86 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 45.38 | 53.58 |
| EES02626 | Sorghum | cytosol | 21.97 | 53.15 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 32.37 | 52.58 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 24.86 | 51.19 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 34.39 | 50.64 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 30.92 | 50.0 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 31.21 | 49.77 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 48.84 | 49.56 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 21.68 | 49.34 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 48.55 | 49.12 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 48.27 | 48.83 |
| CDY02636 | Canola | nucleus | 47.11 | 48.37 |
| Bra002148.1-P | Field mustard | nucleus | 46.82 | 48.21 |
| Bra023669.1-P | Field mustard | nucleus | 46.82 | 48.21 |
| CDY53250 | Canola | nucleus | 46.82 | 48.21 |
| AT5G18270.1 | Thale cress | nucleus | 46.53 | 48.06 |
| Zm00001d028995_P001 | Maize | cytosol | 48.27 | 47.58 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 30.92 | 47.56 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 47.4 | 47.4 |
| AT3G04060.1 | Thale cress | nucleus | 46.24 | 47.34 |
| CDX70804 | Canola | nucleus | 45.95 | 47.18 |
| Bra006449.1-P | Field mustard | nucleus | 45.66 | 47.02 |
| CDY51238 | Canola | nucleus | 45.66 | 46.88 |
| Os07t0684800-01 | Rice | cytosol | 40.75 | 46.84 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 47.11 | 46.84 |
| EER92328 | Sorghum | cytosol | 47.4 | 46.07 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 30.64 | 45.89 |
| KRG94783 | Soybean | nucleus | 53.47 | 45.68 |
| Bra040153.1-P | Field mustard | nucleus | 45.09 | 45.48 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 36.13 | 45.29 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 36.13 | 45.29 |
| Zm00001d022517_P001 | Maize | nucleus | 41.33 | 44.97 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 44.51 | 44.77 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 44.22 | 44.61 |
| Os03t0327100-01 | Rice | nucleus | 45.95 | 44.41 |
| KRH06738 | Soybean | nucleus | 52.02 | 44.23 |
| CDY42901 | Canola | nucleus | 43.93 | 44.19 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 50.87 | 43.67 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 34.1 | 43.22 |
| EER97754 | Sorghum | nucleus | 40.75 | 42.34 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 34.39 | 41.32 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 37.86 | 40.56 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 38.73 | 40.36 |
| KRH08479 | Soybean | nucleus | 47.69 | 40.24 |
| KRH70130 | Soybean | nucleus | 47.69 | 40.24 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 41.04 | 40.23 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 40.75 | 40.06 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 37.28 | 39.69 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 36.99 | 39.63 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 40.17 | 39.6 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 39.6 | 39.37 |
| GSMUA_Achr10P... | Banana | nucleus | 37.28 | 39.33 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 39.88 | 39.09 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 27.17 | 39.0 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 36.71 | 38.72 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 39.02 | 38.46 |
| GSMUA_Achr7P11500_001 | Banana | nucleus | 37.57 | 38.24 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 39.31 | 38.2 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 39.31 | 38.2 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 40.46 | 38.04 |
| Zm00001d005028_P001 | Maize | cytosol | 35.26 | 37.89 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 38.73 | 37.85 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 37.86 | 37.54 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 38.73 | 37.53 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 34.68 | 37.5 |
| GSMUA_Achr11P... | Banana | nucleus | 30.06 | 37.28 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 37.57 | 37.25 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 30.06 | 37.14 |
| GSMUA_Achr10P... | Banana | nucleus | 35.55 | 37.05 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 40.75 | 36.91 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 40.75 | 36.81 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 36.99 | 36.68 |
| GSMUA_Achr11P... | Banana | nucleus | 27.75 | 36.64 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 36.99 | 36.57 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 36.42 | 36.42 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 28.03 | 36.19 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 36.13 | 36.02 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 35.26 | 35.88 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 36.99 | 35.85 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 29.48 | 35.79 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 33.81 | 35.78 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 41.04 | 35.77 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 29.19 | 35.69 |
| Os01t0393100-01 | Rice | nucleus | 33.81 | 35.67 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 30.64 | 35.57 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 28.03 | 35.53 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 36.99 | 35.36 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 37.28 | 34.86 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 27.46 | 34.67 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 29.77 | 34.45 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 31.5 | 34.38 |
| GSMUA_Achr10P... | Banana | cytosol | 35.26 | 34.37 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 38.44 | 34.28 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 37.57 | 34.21 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 30.92 | 33.97 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 37.28 | 33.95 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 30.92 | 33.75 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 26.59 | 33.7 |
| Zm00001d052390_P001 | Maize | nucleus | 35.84 | 33.42 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 40.75 | 33.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.57 | 33.07 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 26.3 | 32.73 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 35.55 | 32.63 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 28.32 | 32.56 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.17 | 32.55 |
| Os12t0123800-01 | Rice | nucleus | 36.99 | 32.32 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 25.72 | 32.13 |
| GSMUA_Achr11P... | Banana | nucleus | 25.72 | 32.01 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 36.71 | 31.51 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 36.13 | 31.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.3 | 31.38 |
| OQU89451 | Sorghum | cytosol | 33.53 | 31.18 |
| Zm00001d008403_P001 | Maize | plastid | 28.61 | 30.75 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 34.68 | 30.69 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 35.55 | 30.67 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 35.55 | 30.6 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 32.08 | 29.92 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 25.14 | 29.9 |
| EES02651 | Sorghum | nucleus | 34.1 | 29.5 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 43.93 | 29.46 |
| EES17917 | Sorghum | cytosol | 34.1 | 29.35 |
| Os11t0127000-01 | Rice | nucleus | 24.57 | 28.81 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 36.13 | 27.47 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G32290_001 |
| EnsemblPlants:GSMUA_Achr6P32290_001 | EnsemblPlants:GSMUA_Achr6T32290_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0TC23 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF7 | SUPFAM:SSF101941 |
| UniParc:UPI000296CDB1 | SEG:seg | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G32290_001]
Coordinates
chr6:-:31746217..31747468
Molecular Weight (calculated)
38472.0 Da
IEP (calculated)
5.133
GRAVY (calculated)
-0.553
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVSVVSKE EEECMNLPPG FRFHPTDEEV ITHYLSPKVV DHSFSATAMG EVDLNRCEPW DLPSNAKMGE KEWFFFCQKD RKYPTGTRTN RATETGFWKA
101: TGKDKEILKG RGVVVGMKKT LVFYRGRAPK GEKTNWVMHE YRLEGTSTLI PNLPKSAKDE WVVCKVFHKD TGLLKKSTLP ALERIDSLGD DFLDSTALPP
201: LMDPPCLDSA TRPGSSFSNK DDSLNFQDVH ASFSSMMGVD YYQVGPDLPD SSSYSFLGSM NLSYLHQEGA MLGALAAAEN DAPSAITRHC KVEQSSNHSV
301: GCHSQETGLS TDHNTEISSV PSKHYDELGD PSSTVPGFDL ENFWQY
101: TGKDKEILKG RGVVVGMKKT LVFYRGRAPK GEKTNWVMHE YRLEGTSTLI PNLPKSAKDE WVVCKVFHKD TGLLKKSTLP ALERIDSLGD DFLDSTALPP
201: LMDPPCLDSA TRPGSSFSNK DDSLNFQDVH ASFSSMMGVD YYQVGPDLPD SSSYSFLGSM NLSYLHQEGA MLGALAAAEN DAPSAITRHC KVEQSSNHSV
301: GCHSQETGLS TDHNTEISSV PSKHYDELGD PSSTVPGFDL ENFWQY
001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
Arabidopsis Description
NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.