Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0854800-03 | |
| Os10t0577800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Os03t0854800-03 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Os10t0577800-01 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29982 | Canola | cytosol | 34.88 | 61.05 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 46.51 | 59.57 |
| EER97754 | Sorghum | nucleus | 63.12 | 57.06 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 51.16 | 55.8 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 27.91 | 55.26 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 50.5 | 55.07 |
| Zm00001d022517_P001 | Maize | nucleus | 58.14 | 55.03 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 61.13 | 52.12 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 60.47 | 51.7 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 42.19 | 51.63 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 59.14 | 50.71 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 59.14 | 50.42 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 58.14 | 50.29 |
| GSMUA_Achr10P... | Banana | cytosol | 37.87 | 50.0 |
| Os03t0327100-01 | Rice | nucleus | 58.14 | 48.88 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 56.81 | 48.72 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 59.47 | 48.64 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 59.8 | 47.12 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 59.8 | 47.0 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 45.18 | 46.42 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 57.14 | 43.32 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 43.52 | 42.81 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 54.82 | 42.53 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 58.8 | 41.45 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 57.81 | 40.94 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 41.86 | 40.91 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 46.84 | 40.75 |
| CDY02636 | Canola | nucleus | 45.18 | 40.36 |
| CDY53250 | Canola | nucleus | 44.85 | 40.18 |
| Bra023669.1-P | Field mustard | nucleus | 44.85 | 40.18 |
| AT5G18270.1 | Thale cress | nucleus | 44.19 | 39.7 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 41.86 | 39.62 |
| Bra002148.1-P | Field mustard | nucleus | 44.19 | 39.58 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 45.51 | 39.48 |
| AT3G04060.1 | Thale cress | nucleus | 43.52 | 38.76 |
| Bra006449.1-P | Field mustard | nucleus | 43.19 | 38.69 |
| CDX70804 | Canola | nucleus | 43.19 | 38.58 |
| CDY51238 | Canola | nucleus | 43.19 | 38.58 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 40.86 | 38.08 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 42.52 | 37.21 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 39.53 | 37.19 |
| Bra040153.1-P | Field mustard | nucleus | 42.19 | 37.03 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 42.19 | 37.03 |
| CDY42901 | Canola | nucleus | 41.2 | 36.05 |
| Os04t0460600-02 | Rice | cytosol, mitochondrion, nucleus | 40.86 | 35.86 |
| Os01t0393100-01 | Rice | nucleus | 38.54 | 35.37 |
| KRG94783 | Soybean | nucleus | 47.18 | 35.06 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 46.18 | 34.49 |
| Os08t0200600-01 | Rice | nucleus | 33.55 | 34.47 |
| KRH06738 | Soybean | nucleus | 46.51 | 34.4 |
| Os02t0579000-01 | Rice | mitochondrion | 38.54 | 33.62 |
| Os09t0497900-01 | Rice | cytosol | 39.2 | 33.52 |
| KRH70130 | Soybean | nucleus | 45.51 | 33.41 |
| KRH08479 | Soybean | nucleus | 45.51 | 33.41 |
| Os06t0675600-01 | Rice | nucleus | 33.55 | 33.22 |
| Os04t0515900-01 | Rice | nucleus | 29.9 | 32.37 |
| Os08t0511200-00 | Rice | cytosol | 36.21 | 31.41 |
| Os12t0123800-01 | Rice | nucleus | 40.86 | 31.06 |
| Os12t0610600-01 | Rice | nucleus | 34.22 | 30.93 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 37.54 | 30.29 |
| Os03t0109000-01 | Rice | nucleus | 27.91 | 28.28 |
| Os10t0477600-01 | Rice | nucleus | 29.9 | 27.78 |
| Os02t0810900-01 | Rice | nucleus | 29.24 | 26.59 |
| Os11t0127000-01 | Rice | nucleus | 24.92 | 25.42 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 43.52 | 25.39 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:4344324 | EMBL:AK073876 | EMBL:AK105645 | ProteinID:BAC83810.1 |
| ProteinID:BAF22585.1 | ProteinID:BAT03274.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EMBL:JN185444 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os07g0684800 | EnsemblPlants:Os07t0684800-01 |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | UniProt:Q6Z4N0 | SUPFAM:SSF101941 |
| UniParc:UPI00001BF46D | RefSeq:XP_015647863.1 | SEG:seg | : | : | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 15Similar to NAM / CUC2-like protein. (Os07t0684800-01);Similar to NAM / CUC2-like protein. (Os07t0684800-02)
Coordinates
chr7:-:29040456..29042297
Molecular Weight (calculated)
34123.3 Da
IEP (calculated)
5.644
GRAVY (calculated)
-0.539
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESEVSVIN QLEEEETRLE LPPGFRFHPT DEEVVTHYLT RKAQDRSFSC VVIADVNLNN CEPWDLPSKA KMGEKEWFFF CHKDRKYPTG MRTNRATASG
101: YWKATGKDKE IFRGRGLLVG MKKTLVFYMG RAPRGEKTPW VMHEYRLDGK LPPNLPRSAK EEWAVCRVFN KDLAAKIAQM PPPPFPRNDS FDLDLDDFLH
201: LDADLPPLID DPFASTSTLK TEPPPPANLM HNHYGYFSLP ASATNYNHSS GAMADQAIRR FCKAEASTAC FSGADADVDP VVDELLSFPD SITDYSYIWK
301: A
101: YWKATGKDKE IFRGRGLLVG MKKTLVFYMG RAPRGEKTPW VMHEYRLDGK LPPNLPRSAK EEWAVCRVFN KDLAAKIAQM PPPPFPRNDS FDLDLDDFLH
201: LDADLPPLID DPFASTSTLK TEPPPPANLM HNHYGYFSLP ASATNYNHSS GAMADQAIRR FCKAEASTAC FSGADADVDP VVDELLSFPD SITDYSYIWK
301: A
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPSKA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.