Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97754 | Sorghum | nucleus | 77.67 | 74.17 |
| CDY29982 | Canola | cytosol | 32.7 | 60.47 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 43.08 | 58.3 |
| Os07t0684800-01 | Rice | cytosol | 55.03 | 58.14 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 48.11 | 55.43 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 47.48 | 54.71 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 59.43 | 53.54 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 59.12 | 53.41 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 25.16 | 52.63 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 60.06 | 51.9 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 57.23 | 51.85 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 56.6 | 51.72 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 57.23 | 51.56 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 56.6 | 51.28 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 39.62 | 51.22 |
| Zm00001d028995_P001 | Maize | cytosol | 53.77 | 48.72 |
| GSMUA_Achr10P... | Banana | cytosol | 34.59 | 48.25 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 52.52 | 47.99 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 57.55 | 47.91 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 56.92 | 47.26 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 57.23 | 46.91 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 56.92 | 45.59 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 60.06 | 44.73 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 40.25 | 43.69 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 56.6 | 42.35 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 44.97 | 41.33 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 39.31 | 40.85 |
| Bra006449.1-P | Field mustard | nucleus | 42.45 | 40.18 |
| CDY51238 | Canola | nucleus | 42.45 | 40.06 |
| CDX70804 | Canola | nucleus | 42.45 | 40.06 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 39.94 | 39.94 |
| CDY02636 | Canola | nucleus | 42.14 | 39.76 |
| CDY53250 | Canola | nucleus | 41.82 | 39.58 |
| Bra023669.1-P | Field mustard | nucleus | 41.82 | 39.58 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 43.08 | 39.48 |
| AT5G18270.1 | Thale cress | nucleus | 41.51 | 39.4 |
| AT3G04060.1 | Thale cress | nucleus | 41.82 | 39.35 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 38.05 | 39.29 |
| Bra002148.1-P | Field mustard | nucleus | 41.51 | 39.29 |
| Zm00001d050893_P001 | Maize | nucleus | 41.2 | 37.64 |
| Bra040153.1-P | Field mustard | nucleus | 40.57 | 37.61 |
| Zm00001d005028_P001 | Maize | cytosol | 38.05 | 37.58 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 40.25 | 37.21 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.94 | 37.03 |
| CDY42901 | Canola | nucleus | 39.94 | 36.92 |
| Zm00001d033308_P001 | Maize | nucleus | 35.85 | 34.97 |
| KRG94783 | Soybean | nucleus | 44.34 | 34.81 |
| KRH06738 | Soybean | nucleus | 43.71 | 34.15 |
| KRH08479 | Soybean | nucleus | 44.03 | 34.15 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 30.19 | 34.04 |
| Zm00001d016950_P002 | Maize | nucleus | 39.94 | 33.78 |
| Zm00001d014405_P001 | Maize | nucleus | 32.39 | 33.77 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 42.45 | 33.5 |
| Zm00001d003414_P002 | Maize | cytosol, mitochondrion, nucleus | 38.36 | 33.42 |
| Zm00001d013717_P001 | Maize | nucleus | 34.59 | 33.33 |
| KRH70130 | Soybean | nucleus | 42.45 | 32.93 |
| Zm00001d035266_P001 | Maize | nucleus | 36.48 | 32.49 |
| Zm00001d052390_P001 | Maize | nucleus | 36.79 | 31.54 |
| Zm00001d041791_P001 | Maize | nucleus | 36.48 | 31.52 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 35.22 | 29.79 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 29.56 | 29.65 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 36.16 | 29.41 |
| Zm00001d006053_P001 | Maize | nucleus | 35.85 | 29.38 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 27.04 | 29.25 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 31.13 | 29.2 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 26.42 | 28.67 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 26.73 | 28.52 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 26.42 | 28.38 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 26.1 | 27.95 |
| Zm00001d008403_P001 | Maize | plastid | 27.67 | 27.33 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 40.88 | 25.19 |
| Zm00001d031463_P002 | Maize | mitochondrion | 30.19 | 22.75 |
Protein Annotations
| EntrezGene:107403159 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:F1DJV8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EMBL:HQ858716 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| ProteinID:ONM60901.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 |
| UniParc:UPI0001FF923F | EnsemblPlantsGene:Zm00001d022517 | EnsemblPlants:Zm00001d022517_P001 | EnsemblPlants:Zm00001d022517_T001 | SEG:seg | : |
Description
NAC-transcription factor 2NAC transcription factor
Coordinates
chr7:+:179273873..179275691
Molecular Weight (calculated)
35345.8 Da
IEP (calculated)
7.360
GRAVY (calculated)
-0.593
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSRLDLP PGFRFHPTDE EVVSHYLTHK ALDSRFSCVV IADADLNKIE PWDLPSKAKM GEKEWFFFCH KDRKYPTGMR TNRATASGYW KATGKDKEIF
101: RGSSSSPRRV LVGMKKTLVF YTGRAPRGGK TPWVMHEYRL EGSLPHNLHR GAKDEWAVCK VINKDLAGKA GQQQMAPPPH AVSVGMERSD SLAFLDDLVL
201: DNADDLPPLV DSTTYAAGSL FAAAGTTTTT NDDSGGYQQA TKAEPQPQLP APSNSPYQHQ QQAIRRHCKA EAPAPAMVLS PSRETPGADM FQLQHVDELL
301: QLDGGFMEDY YNMNMWKV
101: RGSSSSPRRV LVGMKKTLVF YTGRAPRGGK TPWVMHEYRL EGSLPHNLHR GAKDEWAVCK VINKDLAGKA GQQQMAPPPH AVSVGMERSD SLAFLDDLVL
201: DNADDLPPLV DSTTYAAGSL FAAAGTTTTT NDDSGGYQQA TKAEPQPQLP APSNSPYQHQ QQAIRRHCKA EAPAPAMVLS PSRETPGADM FQLQHVDELL
301: QLDGGFMEDY YNMNMWKV
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPSKA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.