Factsheet for Zm00001d050893_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05316	Sorghum	nucleus	83.62	80.39
Zm00001d016950_P002	Maize	nucleus	81.03	75.0
Os02t0579000-01	Rice	mitochondrion	65.23	65.8
Zm00001d003414_P002	Maize	cytosol, mitochondrion, nucleus	58.05	55.34
Zm00001d022517_P001	Maize	nucleus	37.64	41.2
Zm00001d014405_P001	Maize	nucleus	34.48	39.34
Zm00001d047554_P001	Maize	cytoskeleton, cytosol, nucleus	39.08	39.08
Zm00001d024268_P001	Maize	cytosol, nucleus, plastid	31.61	39.01
Zm00001d028995_P001	Maize	cytosol	38.79	38.46
Zm00001d033308_P001	Maize	nucleus	35.34	37.73
Zm00001d005028_P001	Maize	cytosol	34.48	37.27
Zm00001d013717_P001	Maize	nucleus	34.48	36.36
Zm00001d002285_P001	Maize	cytosol, nucleus, plastid	33.05	36.28
Zm00001d035266_P001	Maize	nucleus	36.78	35.85
Zm00001d041791_P001	Maize	nucleus	36.21	34.24
Zm00001d051140_P001	Maize	cytosol, mitochondrion, nucleus	28.45	33.67
Zm00001d052390_P001	Maize	nucleus	35.34	33.15
Zm00001d018435_P001	Maize	cytosol, mitochondrion, nucleus	27.59	32.43
Zm00001d025861_P001	Maize	cytosol, nucleus, plastid	27.3	32.42
Zm00001d041472_P001	Maize	cytosol, nucleus, peroxisome	31.32	32.15
Zm00001d003052_P001	Maize	cytosol, mitochondrion, nucleus	27.3	31.99
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	34.48	31.91
Zm00001d051956_P001	Maize	cytosol, mitochondrion, nucleus	27.3	31.88
Zm00001d006053_P001	Maize	nucleus	34.77	31.19
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	34.48	30.69
Zm00001d008403_P001	Maize	plastid	26.44	28.57
Zm00001d031463_P002	Maize	mitochondrion	31.32	25.83

Protein Annotations

EntrezGene:100281380	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:AQK53207.1	ProteinID:AQK53208.1	EMBL:BT065898
UniProt:C0PC79	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
EMBL:KJ728021	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744
PANTHER:PTHR31744:SF12	SUPFAM:SSF101941	UniParc:UPI000194B04A	EnsemblPlantsGene:Zm00001d050893	EnsemblPlants:Zm00001d050893_P001	EnsemblPlants:Zm00001d050893_T001
SEG:seg	:	:	:	:	:

Description

NAC-transcription factor 40NAC domain-containing protein 79

Coordinates

chr4:+:128778456..128780327

Molecular Weight (calculated)

38021.2 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.397

Length

348 amino acids

Sequence
(BLAST)

001: MEHDVHHQHQ QAMELPPGFR FHPTDEELIT HYLARKAADA RFAPRAVGEA DLNKCEPWDL PSRATMGEKE WYFFCVKDRK YPTGLRTNRA TESGYWKATG
101: KDREIFRSKA LVGMKKTLVF YTGRAPRGGK TGWVMHEYRL HGKHASSSRL MPSSVRAGAS KDEWVLCRVF KKSIEPPPSV GKRSSVACTG TMVVEDVVGP
201: PSMSMEDDLT ACALPPLMDV SGGGGANMAA ASIELLAPPA PHVTCFSNAL EGQFFLNPPC LHPSTSPLRL ASMVQAQAQA QYDGDAGMVL QLLQEAGGWY
301: SKLGEGERLS GGASQDTGVT SEVNVNPAEI SSTRHHIMDP EAASFWGF

Best Arabidopsis Sequence Match ( AT5G07680.1 )
(BLAST)

001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.