Factsheet for Os02t0579000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050893_P001	Maize	nucleus	65.8	65.23
EES05316	Sorghum	nucleus	66.67	63.54
Zm00001d016950_P002	Maize	nucleus	66.67	61.17
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	57.1	57.43
Os07t0684800-01	Rice	cytosol	33.62	38.54
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	34.78	37.5
Os03t0327100-01	Rice	nucleus	37.97	36.59
Os08t0200600-01	Rice	nucleus	31.01	36.52
Os06t0675600-01	Rice	nucleus	31.88	36.18
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	33.62	35.91
Os01t0393100-01	Rice	nucleus	33.91	35.67
Os04t0515900-01	Rice	nucleus	28.12	34.89
Os09t0497900-01	Rice	cytosol	35.07	34.38
Os06t0344900-00	Rice	cytosol, nucleus, plastid	35.65	32.98
Os08t0511200-00	Rice	cytosol	31.88	31.7
Os12t0610600-01	Rice	nucleus	30.43	31.53
Os03t0109000-01	Rice	nucleus	26.67	30.98
Os02t0810900-01	Rice	nucleus	28.99	30.21
Os12t0123800-01	Rice	nucleus	33.33	29.04
Os10t0477600-01	Rice	nucleus	26.09	27.78
Os11t0127000-01	Rice	nucleus	21.45	25.08

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:BAF09142.1	ProteinID:BAS79405.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os02g0579000
EnsemblPlants:Os02t0579000-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF12	UniProt:Q0E046
SUPFAM:SSF101941	UniParc:UPI0000DF076E	SEG:seg	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 1No apical meristem (NAM) protein domain containing protein. (Os02t0579000-01)

Coordinates

chr2:+:22258846..22260658

Molecular Weight (calculated)

37932.0 Da

IEP (calculated)

7.412

GRAVY (calculated)

-0.472

Length

345 amino acids

Sequence
(BLAST)

001: MRLARQQQQV VVAATMEHDV HHHRQMMQQQ QQQEMDLPPG FRFHPTDEEL ITHYLLRKAA DPAGFAARAV GEADLNKCEP WDLPSRATMG EKEWYFFCVK
101: DRKYPTGLRT NRATESGYWK ATGKDREIFR GKALVGMKKT LVFYTGRAPR GGKTGWVMHE YRIHGKHAAA NSKDQEWVLC RVFKKSLELA PAAAAAVGRR
201: GAGAGTDVGP SSMPMADDVV GLAPCALPPA HVTCFSNALE GQFLDTPYLL PAADPADHLA MSSASPFLEA LQMQYVQDAA AAGGAGMVHE LLMGGGWYCN
301: KGERERLSGA SQDTGLTSSE VNPGEISSSS RQQRMDHHDA SLWAY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.