Factsheet for Zm00001d016950_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05316	Sorghum	nucleus	80.05	83.15
Zm00001d050893_P001	Maize	nucleus	75.0	81.03
Os02t0579000-01	Rice	mitochondrion	61.17	66.67
Zm00001d003414_P002	Maize	cytosol, mitochondrion, nucleus	53.19	54.79
Zm00001d022517_P001	Maize	nucleus	33.78	39.94
Zm00001d024268_P001	Maize	cytosol, nucleus, plastid	28.19	37.59
Zm00001d033308_P001	Maize	nucleus	32.45	37.42
Zm00001d014405_P001	Maize	nucleus	30.32	37.38
Zm00001d047554_P001	Maize	cytoskeleton, cytosol, nucleus	34.57	37.36
Zm00001d005028_P001	Maize	cytosol	31.65	36.96
Zm00001d028995_P001	Maize	cytosol	34.04	36.47
Zm00001d035266_P001	Maize	nucleus	33.51	35.29
Zm00001d013717_P001	Maize	nucleus	30.85	35.15
Zm00001d002285_P001	Maize	cytosol, nucleus, plastid	28.72	34.07
Zm00001d041791_P001	Maize	nucleus	33.24	33.97
Zm00001d051140_P001	Maize	cytosol, mitochondrion, nucleus	25.53	32.65
Zm00001d052390_P001	Maize	nucleus	31.91	32.34
Zm00001d051956_P001	Maize	cytosol, mitochondrion, nucleus	25.53	32.21
Zm00001d003052_P001	Maize	cytosol, mitochondrion, nucleus	25.27	31.99
Zm00001d041472_P001	Maize	cytosol, nucleus, peroxisome	28.72	31.86
Zm00001d018435_P001	Maize	cytosol, mitochondrion, nucleus	24.73	31.42
Zm00001d025861_P001	Maize	cytosol, nucleus, plastid	24.47	31.4
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	31.65	30.43
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	30.32	30.32
Zm00001d006053_P001	Maize	nucleus	30.59	29.64
Zm00001d008403_P001	Maize	plastid	24.47	28.57
Zm00001d031463_P002	Maize	mitochondrion	28.46	25.36

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1D6HBE3	ProteinID:AQK72021.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF12	SUPFAM:SSF101941	UniParc:UPI0008431191	EnsemblPlantsGene:Zm00001d016950
EnsemblPlants:Zm00001d016950_P002	EnsemblPlants:Zm00001d016950_T002	SEG:seg	:	:	:

Description

NAC-transcription factor 30NAC30 NAC type transcription factor

Coordinates

chr5:+:180967095..180968597

Molecular Weight (calculated)

40177.3 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.342

Length

376 amino acids

Sequence
(BLAST)

001: MEHDVDYHHH HHQQQQEEEE EAMELPPGFR FHPTDEELIT HYLARKAADP RFAPRAVGEA DLNKCEPWDL PSRATMGDKE WYFFCVKDRK YPTGLKANRA
101: TESGYWKATG KDREIFRGKA LVGMKKTLVF YTGRAPRGGK TGWVMHEYRL QGKHAAAATS SSLVVPSSVR AGASSKQDEW VLCRVFKKSI EPPSVPGSKR
201: SSSVACMGTE GTGVGVGPSS MSTEDDFAAC AALPPLMDVS GGGANMSLSA AAAAAAASIE LTPPAAPAPH VTCFSNAPLE GQFLNPPFLL PSAAAAADHI
301: ALAASASPFL ASMMMQQQAQ YAGDAGVVHG DGLLQGAGGW YGKLAGERER LSGGGVPAEI SSTRHCMDHE ASFWGF

Best Arabidopsis Sequence Match ( AT5G07680.1 )
(BLAST)

001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.