Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92328 | Sorghum | cytosol | 90.03 | 88.76 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 86.61 | 87.36 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 74.07 | 76.02 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 73.5 | 75.66 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 73.5 | 75.44 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 72.65 | 73.7 |
| Os03t0327100-01 | Rice | nucleus | 67.81 | 66.48 |
| CDY29982 | Canola | cytosol | 31.34 | 63.95 |
| GSMUA_Achr10P... | Banana | cytosol | 36.75 | 56.58 |
| Zm00001d022517_P001 | Maize | nucleus | 48.72 | 53.77 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 36.75 | 52.44 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 47.58 | 48.27 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 47.58 | 48.13 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 41.88 | 48.04 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 42.45 | 46.86 |
| Bra023669.1-P | Field mustard | nucleus | 44.73 | 46.73 |
| CDY53250 | Canola | nucleus | 44.73 | 46.73 |
| CDY02636 | Canola | nucleus | 44.73 | 46.59 |
| Bra002148.1-P | Field mustard | nucleus | 44.16 | 46.13 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 40.17 | 45.78 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 38.18 | 45.73 |
| AT5G18270.1 | Thale cress | nucleus | 43.59 | 45.67 |
| Bra006449.1-P | Field mustard | nucleus | 43.59 | 45.54 |
| CDY51238 | Canola | nucleus | 43.3 | 45.1 |
| CDX70804 | Canola | nucleus | 43.3 | 45.1 |
| Bra040153.1-P | Field mustard | nucleus | 42.45 | 43.44 |
| AT3G04060.1 | Thale cress | nucleus | 41.6 | 43.2 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 41.6 | 42.44 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 41.31 | 42.27 |
| CDY42901 | Canola | nucleus | 40.74 | 41.57 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 47.01 | 40.94 |
| KRG94783 | Soybean | nucleus | 45.87 | 39.75 |
| Zm00001d050893_P001 | Maize | nucleus | 38.46 | 38.79 |
| KRH06738 | Soybean | nucleus | 44.73 | 38.57 |
| Zm00001d005028_P001 | Maize | cytosol | 35.33 | 38.51 |
| KRH08479 | Soybean | nucleus | 44.73 | 38.29 |
| KRH70130 | Soybean | nucleus | 44.44 | 38.05 |
| Zm00001d033308_P001 | Maize | nucleus | 34.19 | 36.81 |
| Zm00001d003414_P002 | Maize | cytosol, mitochondrion, nucleus | 36.75 | 35.34 |
| Zm00001d013717_P001 | Maize | nucleus | 32.76 | 34.85 |
| Zm00001d024268_P001 | Maize | cytosol, nucleus, plastid | 27.64 | 34.4 |
| Zm00001d035266_P001 | Maize | nucleus | 34.76 | 34.17 |
| Zm00001d016950_P002 | Maize | nucleus | 36.47 | 34.04 |
| Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 35.9 | 33.51 |
| Zm00001d052390_P001 | Maize | nucleus | 35.33 | 33.42 |
| Zm00001d041791_P001 | Maize | nucleus | 34.19 | 32.61 |
| Zm00001d006053_P001 | Maize | nucleus | 35.61 | 32.22 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 26.78 | 31.97 |
| Zm00001d014405_P001 | Maize | nucleus | 27.64 | 31.8 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 25.93 | 31.06 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 34.47 | 30.95 |
| Zm00001d002285_P001 | Maize | cytosol, nucleus, plastid | 27.92 | 30.91 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 25.36 | 30.07 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 25.36 | 29.97 |
| Zm00001d008403_P001 | Maize | plastid | 27.35 | 29.81 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 24.79 | 29.19 |
| Zm00001d041472_P001 | Maize | cytosol, nucleus, peroxisome | 27.35 | 28.32 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 38.75 | 26.36 |
| Zm00001d031463_P002 | Maize | mitochondrion | 28.77 | 23.93 |
Protein Annotations
| EntrezGene:103634602 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6K1B7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | ProteinID:ONL97560.1 |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 | UniParc:UPI0004DE9ACC |
| EnsemblPlantsGene:Zm00001d028995 | EnsemblPlants:Zm00001d028995_P001 | EnsemblPlants:Zm00001d028995_T001 | SEG:seg | : | : |
Description
NAC-transcription factor 11Arabidopsis NAC domain containing protein 87
Coordinates
chr1:-:54034211..54036320
Molecular Weight (calculated)
38919.2 Da
IEP (calculated)
5.858
GRAVY (calculated)
-0.419
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVSVINQA EVEDAGAGQL MDLPPGFRFH PTDEEIISHY LTHKALDHRF VSGVIGEVDL NRIEPWDLPG RAKMGEKEWY FFCHKDRKYP TGTRTNRATE
101: TGYWKATGKD KEIFRGRGVL VGMKKTLVFY RGRAPRGEKT GWVMHEFRLE GRLPQPLPRS AKDEWAVCKV FNKELQAARS EPLLAAAGAA ELERVGSLGF
201: LNELLDSAEL PALVGADVDE VIDFKGPAPA SVPDASYLPV KMEEHALLQM QQCQYQPPPP MFYPSQYFSL PAMNSGHLPP AIRRYCKAEQ QVVSAQTASV
301: ISPSRETGLS TDPNAAGGYA EISSAATPSS SHQFLPELDD PALNLADLWK Y
101: TGYWKATGKD KEIFRGRGVL VGMKKTLVFY RGRAPRGEKT GWVMHEFRLE GRLPQPLPRS AKDEWAVCKV FNKELQAARS EPLLAAAGAA ELERVGSLGF
201: LNELLDSAEL PALVGADVDE VIDFKGPAPA SVPDASYLPV KMEEHALLQM QQCQYQPPPP MFYPSQYFSL PAMNSGHLPP AIRRYCKAEQ QVVSAQTASV
301: ISPSRETGLS TDPNAAGGYA EISSAATPSS SHQFLPELDD PALNLADLWK Y
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.