Factsheet for Bra031950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023252.1-P
Bra035511.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	Bra023252.1-P	AT1G32230.1	19548978
AT3G04060.1	Bra035511.1-P	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50879	Canola	cytoskeleton, cytosol, nucleus	99.42	99.71
Bra040153.1-P	Field mustard	nucleus	85.17	85.42
AT3G04060.1	Thale cress	nucleus	81.1	82.54
Bra023669.1-P	Field mustard	nucleus	65.7	67.26
Bra002148.1-P	Field mustard	nucleus	65.12	66.67
Bra006449.1-P	Field mustard	nucleus	64.83	66.37
GSMUA_Achr5P07600_001	Banana	cytosol	42.73	59.76
GSMUA_Achr10P...	Banana	cytosol	36.63	55.26
EES02626	Sorghum	cytosol	22.67	54.55
TraesCS3B01G092800.1	Wheat	cytosol	31.69	51.17
HORVU3Hr1G014090.1	Barley	nucleus	31.98	50.69
TraesCS3A01G077900.1	Wheat	nucleus	31.4	50.47
GSMUA_Achr9P16920_001	Banana	cytosol	43.9	49.35
GSMUA_Achr3P09520_001	Banana	cytosol	45.35	49.06
TraesCS3D01G078500.1	Wheat	nucleus	31.1	47.56
HORVU2Hr1G017360.1	Barley	nucleus	20.93	47.37
GSMUA_Achr7P18330_001	Banana	nucleus	42.15	47.08
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	31.69	46.38
GSMUA_Achr6P08600_001	Banana	nucleus	46.51	46.11
Bra009246.1-P	Field mustard	nucleus	37.79	45.94
Bra028685.1-P	Field mustard	nucleus	41.86	45.86
Bra028435.1-P	Field mustard	nucleus	38.08	45.49
VIT_08s0007g07640.t01	Wine grape	nucleus	52.62	44.91
GSMUA_Achr3P18020_001	Banana	nucleus	38.08	44.71
Bra025658.1-P	Field mustard	nucleus	37.5	44.64
GSMUA_Achr6P32290_001	Banana	nucleus	44.77	44.51
TraesCS4B01G174000.1	Wheat	cytosol	43.9	44.28
Bra012960.1-P	Field mustard	nucleus	41.86	44.04
TraesCS4A01G130600.1	Wheat	nucleus	43.6	43.86
Bra029313.1-P	Field mustard	nucleus	41.28	43.69
TraesCS4D01G176000.1	Wheat	nucleus	43.31	43.57
Zm00001d047554_P001	Maize	cytoskeleton, cytosol, nucleus	43.9	43.39
HORVU4Hr1G051360.3	Barley	nucleus	43.02	42.77
EER92328	Sorghum	cytosol	44.19	42.7
Os07t0684800-01	Rice	cytosol	37.21	42.52
KRG94783	Soybean	nucleus	50.0	42.47
TraesCS2A01G101200.1	Wheat	nucleus	33.72	42.03
Zm00001d028995_P001	Maize	cytosol	42.44	41.6
KRH06738	Soybean	nucleus	49.13	41.52
TraesCS2D01G100800.1	Wheat	nucleus	33.14	41.3
KRH08479	Soybean	nucleus	49.13	41.22
KRH70130	Soybean	nucleus	48.84	40.98
Bra025374.1-P	Field mustard	cytoskeleton, cytosol, nucleus	36.34	40.45
Zm00001d022517_P001	Maize	nucleus	37.21	40.25
EER97754	Sorghum	nucleus	38.95	40.24
Os03t0327100-01	Rice	nucleus	41.86	40.22
Bra001586.1-P	Field mustard	nucleus	35.76	39.81
Bra021592.1-P	Field mustard	nucleus	34.88	39.6
Bra037585.1-P	Field mustard	nucleus	34.3	39.33
TraesCS7B01G094000.1	Wheat	nucleus	31.1	39.19
Bra007855.1-P	Field mustard	nucleus	35.76	38.8
Bra032095.1-P	Field mustard	nucleus	35.76	38.8
Bra036223.1-P	Field mustard	nucleus	36.63	38.41
Bra001705.1-P	Field mustard	nucleus	33.14	38.13
Bra022319.1-P	Field mustard	nucleus	34.01	38.11
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	35.17	37.81
TraesCS5A01G245900.2	Wheat	nucleus	35.76	37.5
TraesCS2B01G118400.1	Wheat	cytosol, nucleus, plastid	37.79	37.04
Bra003023.1-P	Field mustard	nucleus	38.37	36.97
Zm00001d005028_P001	Maize	cytosol	34.3	36.65
Os01t0393100-01	Rice	nucleus	34.88	36.59
TraesCS5B01G243300.1	Wheat	nucleus	28.49	36.57
TraesCS2D01G100900.1	Wheat	nucleus	37.5	36.54
Bra034713.1-P	Field mustard	nucleus	29.07	36.36
TraesCS2B01G118500.1	Wheat	cytosol	37.21	36.36
TraesCS2B01G118200.1	Wheat	cytosol, nucleus, plastid	36.92	36.18
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	36.34	35.92
TraesCS7B01G100300.1	Wheat	nucleus	33.72	35.91
TraesCS2A01G101400.1	Wheat	cytosol	36.63	35.69
TraesCS7D01G189900.1	Wheat	nucleus	33.43	35.6
Bra001480.1-P	Field mustard	nucleus	28.49	35.38
Bra022685.1-P	Field mustard	nucleus	37.21	34.88
TraesCS2D01G100600.1	Wheat	cytosol, nucleus, plastid	36.92	34.51
Bra008259.1-P	Field mustard	cytosol	31.4	33.75
Bra030820.1-P	Field mustard	nucleus	31.1	33.33
TraesCS7D01G543400.1	Wheat	nucleus	32.85	33.24
Bra015750.1-P	Field mustard	cytosol	32.27	33.13
TraesCS7A01G194700.1	Wheat	nucleus	33.43	32.95
TraesCS7D01G196300.1	Wheat	cytosol, nucleus, peroxisome	33.43	32.95
TraesCS7A01G152500.1	Wheat	nucleus	34.01	32.87
TraesCS7B01G056300.1	Wheat	nucleus	34.01	32.77
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	36.34	32.72
TraesCS7A01G189200.1	Wheat	nucleus	33.14	32.66
HORVU7Hr1G039700.1	Barley	nucleus	32.85	32.66
TraesCS7D01G154200.1	Wheat	nucleus	33.72	32.58
TraesCS3B01G092900.3	Wheat	nucleus	33.72	32.49
HORVU7Hr1G031260.1	Barley	nucleus	33.43	32.49
TraesCS7A01G569300.1	Wheat	cytosol	34.01	32.32
HORVU2Hr1G017400.3	Barley	nucleus	35.76	32.11
Os12t0123800-01	Rice	nucleus	36.92	32.07
TraesCS7B01G489500.2	Wheat	cytosol	32.27	31.99
HORVU2Hr1G017350.1	Barley	nucleus	36.63	31.74
TraesCS2B01G118300.1	Wheat	cytosol	35.47	31.44
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	31.69	31.14
Zm00001d052390_P001	Maize	nucleus	33.43	31.0
OQU89451	Sorghum	cytosol	33.14	30.65
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	32.85	30.54
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	33.14	30.24
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	34.3	30.18
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	37.21	30.12
EES02651	Sorghum	nucleus	34.88	30.0
EES07908	Sorghum	nucleus, peroxisome, plastid	34.59	29.97
TraesCS2D01G100700.1	Wheat	cytosol, endoplasmic reticulum, nucleus	36.63	29.51
TraesCS7A01G569100.1	Wheat	nucleus	32.56	29.47
TraesCS7D01G543500.2	Wheat	endoplasmic reticulum	32.56	29.47
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	31.69	29.38
TraesCS5A01G143100.1	Wheat	nucleus	34.3	29.28
Zm00001d008403_P001	Maize	plastid	27.33	29.19
EES17917	Sorghum	cytosol	34.01	29.1
TraesCS5B01G141900.1	Wheat	nucleus	33.72	28.93
TraesCS5D01G148900.1	Wheat	nucleus	33.72	28.86
Os11t0127000-01	Rice	nucleus	23.84	27.8
GSMUA_Achr8P21470_001	Banana	nucleus	41.57	27.71
Bra010362.1-P	Field mustard	nucleus	26.74	26.51
Bra011037.1-P	Field mustard	nucleus	26.45	26.45
HORVU5Hr1G045640.7	Barley	mitochondrion	34.3	25.93
Bra024194.1-P	Field mustard	nucleus	26.45	25.93

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra031950	EnsemblPlants:Bra031950.1	EnsemblPlants:Bra031950.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4ET20	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF46	SUPFAM:SSF101941
UniParc:UPI0002546527	SEG:seg	:	:	:	:

Description

AT3G04060 (E=3e-153) anac046 | anac046 (Arabidopsis NAC domain containing protein 46); transcription factor

Coordinates

chrA02:-:26947186..26948566

Molecular Weight (calculated)

38429.3 Da

IEP (calculated)

6.573

GRAVY (calculated)

-0.531

Length

344 amino acids

Sequence
(BLAST)

001: MVEEVGAVVN QGGDHEVVDL PPGFRFHPTD EEIITHYLKE KVFNVQFTSA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATLSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYRGR APKGEKTNWV MHEFRLDGIY SYHNLPKSSR DEWVVCRVFH KNAPPPTTIT TTTNQLIRIE SLDNIDHLLD
201: FSSLPPLIDP GFMGQPGPSL SGSGQQNNLK PILHHPPTAA IDNTYFPAHT VNHTYHSVPS SGSGLVYGTG SGNNNNGMIK LEHSLVSVSQ ETGLSSDMNT
301: TATPEICSYT RMVNSAANEA MMDGNKTSYD DDDLGIFWDD YKLI

Best Arabidopsis Sequence Match ( AT3G04060.1 )
(BLAST)

001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS

Arabidopsis Description

anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.