Factsheet for Os12t0123800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0854800-03
Os10t0577800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	Os03t0854800-03	AT1G32230.1	19548978
AT3G04060.1	Os10t0577800-01	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0127000-01	Rice	nucleus	59.09	79.32
CDY29982	Canola	cytosol	26.01	59.88
Zm00001d005028_P001	Maize	cytosol	42.68	52.48
EES07908	Sorghum	nucleus, peroxisome, plastid	49.24	49.12
Zm00001d052390_P001	Maize	nucleus	45.71	48.79
GSMUA_Achr5P07600_001	Banana	cytosol	30.05	48.37
TraesCS5A01G143100.1	Wheat	nucleus	48.23	47.39
TraesCS5D01G148900.1	Wheat	nucleus	47.47	46.77
TraesCS5B01G141900.1	Wheat	nucleus	47.22	46.63
GSMUA_Achr10P...	Banana	cytosol	26.26	45.61
HORVU5Hr1G045640.7	Barley	mitochondrion	47.47	41.32
Os07t0684800-01	Rice	cytosol	31.06	40.86
GSMUA_Achr3P18020_001	Banana	nucleus	30.05	40.61
GSMUA_Achr7P18330_001	Banana	nucleus	31.57	40.58
GSMUA_Achr9P16920_001	Banana	cytosol	31.06	40.2
GSMUA_Achr3P09520_001	Banana	cytosol	31.06	38.68
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	31.06	38.44
Os01t0393100-01	Rice	nucleus	31.06	37.5
GSMUA_Achr6P08600_001	Banana	nucleus	32.58	37.18
CDY50879	Canola	cytoskeleton, cytosol, nucleus	32.07	37.03
AT5G18270.1	Thale cress	nucleus	31.31	37.01
GSMUA_Achr6P32290_001	Banana	nucleus	32.32	36.99
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	32.07	36.92
AT3G04060.1	Thale cress	nucleus	31.31	36.69
CDY53250	Canola	nucleus	31.06	36.61
Bra023669.1-P	Field mustard	nucleus	31.06	36.61
Os08t0200600-01	Rice	nucleus	27.02	36.52
CDY02636	Canola	nucleus	31.06	36.5
Bra040153.1-P	Field mustard	nucleus	31.57	36.44
Bra006449.1-P	Field mustard	nucleus	30.81	36.31
CDY51238	Canola	nucleus	30.81	36.2
CDX70804	Canola	nucleus	30.81	36.2
CDY42901	Canola	nucleus	31.31	36.05
Os06t0675600-01	Rice	nucleus	27.53	35.86
Os09t0497900-01	Rice	cytosol	31.57	35.51
Bra002148.1-P	Field mustard	nucleus	30.05	35.42
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	28.79	35.29
Os03t0327100-01	Rice	nucleus	31.31	34.64
KRG94783	Soybean	nucleus	35.35	34.57
Os04t0515900-01	Rice	nucleus	24.24	34.53
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	29.55	34.11
KRH06738	Soybean	nucleus	34.85	33.91
Os02t0579000-01	Rice	mitochondrion	29.04	33.33
VIT_08s0007g07640.t01	Wine grape	nucleus	33.08	32.51
KRH70130	Soybean	nucleus	33.59	32.44
KRH08479	Soybean	nucleus	33.33	32.2
Os06t0344900-00	Rice	cytosol, nucleus, plastid	30.05	31.9
Os08t0511200-00	Rice	cytosol	27.27	31.12
Os03t0109000-01	Rice	nucleus	22.22	29.63
Os12t0610600-01	Rice	nucleus	24.75	29.43
Os02t0810900-01	Rice	nucleus	23.99	28.7
Os10t0477600-01	Rice	nucleus	22.73	27.78
GSMUA_Achr8P21470_001	Banana	nucleus	35.61	27.33

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4351370	UniProt:A0A2H4CLX7	EMBL:AB182278	ProteinID:ABA95706.1
ProteinID:BAF29054.1	ProteinID:BAT15672.1	ProteinID:EAZ19493.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003441	InterPro:IPR036093	EMBL:KT957810	InterPro:NAC-dom	InterPro:NAC_dom_sf
EnsemblPlantsGene:Os12g0123800	EnsemblPlants:Os12t0123800-01	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23
UniProt:Q5CD17	SUPFAM:SSF101941	UniParc:UPI0000627628	RefSeq:XP_015620530.1	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 300No apical meristem (NAM) protein domain containing protein. (Os12t0123800-01)

Coordinates

chr12:+:1146995..1148742

Molecular Weight (calculated)

43850.4 Da

IEP (calculated)

9.178

GRAVY (calculated)

-0.584

Length

396 amino acids

Sequence
(BLAST)

001: MVESTTSLVK LEQDGGLFLP PGFRFHPTDA EVILSYLLQK LLNPSFTSLP IGEVDLNKCE PWDLPSKAKM GEKEWYFFSH KDMKYPTGMR TNRATKEGYW
101: KATGKDREIF RQPAAVNTSS YGGSSNKKKQ LVGMKKTLVF YMGRAPKGTK TNWVMHEFRL HANLHNHHPN LRLNPKDEWV VCKVFHKKQG DEAINNQQQQ
201: PQYAAVDQYS AETPNSGSSV VQAGDIDGGD DFFQLDDIID PSIYFVSNSS NILSAPPNNN NAVYSVSAST TTTNTTAVSF QQQPNYYSLI NKSSSSSSSN
301: YSAPLQQHVS SWNITPGAGG AHGIGSSYYN LQQQQAAMVK ALENVIAVPN FGTLLPSSNK LKGLSKSAMA GLTQQNPLGV PQYKIENYGD HYISRQ

Best Arabidopsis Sequence Match ( AT3G04060.1 )
(BLAST)

001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS

Arabidopsis Description

anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.