Factsheet for Os10t0477600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51707	Canola	cytosol	31.79	65.19
CDX92881	Canola	cytosol	31.48	62.58
Os04t0515900-01	Rice	nucleus	48.77	56.83
GSMUA_AchrUn_...	Banana	nucleus	48.46	54.14
GSMUA_Achr8P18980_001	Banana	nucleus	45.37	53.85
GSMUA_Achr5P18670_001	Banana	nucleus	45.37	53.85
GSMUA_Achr11P...	Banana	nucleus	43.52	53.82
GSMUA_Achr1P10860_001	Banana	nucleus	46.6	51.89
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	43.83	51.26
GSMUA_Achr11P...	Banana	nucleus	43.52	50.72
GSMUA_Achr6P36550_001	Banana	nucleus	42.9	50.0
GSMUA_AchrUn_...	Banana	nucleus	37.35	47.08
Solyc09g025310.2.1	Tomato	nucleus	38.58	46.3
Solyc06g008360.2.1	Tomato	nucleus	37.96	43.62
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	37.04	43.32
PGSC0003DMT400065559	Potato	nucleus	37.65	43.26
PGSC0003DMT400051915	Potato	cytosol	37.35	42.61
KRH67403	Soybean	cytosol, nucleus, plastid	38.89	42.57
KRG95684	Soybean	cytosol, nucleus, peroxisome	38.58	42.52
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	31.79	42.04
KRH32193	Soybean	cytosol, nucleus, plastid	38.27	41.89
Os02t0810900-01	Rice	nucleus	40.74	39.88
Os03t0109000-01	Rice	nucleus	35.8	39.06
CDY35197	Canola	nucleus	40.12	38.92
CDY14236	Canola	cytosol	40.12	38.69
CDX97445	Canola	cytosol	39.81	38.39
Bra011037.1-P	Field mustard	nucleus	40.12	37.79
CDY38380	Canola	nucleus	39.81	37.5
Bra010362.1-P	Field mustard	nucleus	40.12	37.46
Bra024194.1-P	Field mustard	nucleus	40.43	37.32
AT4G28530.1	Thale cress	nucleus	40.43	37.22
Os08t0200600-01	Rice	nucleus	33.33	36.86
Os06t0675600-01	Rice	nucleus	33.33	35.53
Os12t0610600-01	Rice	nucleus	35.19	34.23
Os07t0684800-01	Rice	cytosol	27.78	29.9
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	29.32	29.41
Os08t0511200-00	Rice	cytosol	29.94	27.95
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	29.01	27.41
Os09t0497900-01	Rice	cytosol	29.32	26.99
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	26.54	26.88
Os02t0579000-01	Rice	mitochondrion	27.78	26.09
Os03t0327100-01	Rice	nucleus	28.7	25.98
Os01t0393100-01	Rice	nucleus	25.93	25.61
Os06t0344900-00	Rice	cytosol, nucleus, plastid	27.78	24.13
Os12t0123800-01	Rice	nucleus	27.78	22.73
Os11t0127000-01	Rice	nucleus	18.52	20.34
CDY51708	Canola	nucleus	10.49	17.09
CDX92880	Canola	nucleus	10.19	16.67

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4348901	ProteinID:AAK13151.1	ProteinID:AAP54279.1	EMBL:AK119558
ProteinID:BAF26771.1	ProteinID:BAT11306.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os10g0477600	EnsemblPlants:Os10t0477600-01	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF4	UniProt:Q9AV06	SUPFAM:SSF101941	UniParc:UPI00000A8EC1
RefSeq:XP_015613250.1	SEG:seg	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 120Similar to NAM / CUC2-like protein. (Os10t0477600-01)

Coordinates

chr10:+:17849091..17851345

Molecular Weight (calculated)

35639.0 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.452

Length

324 amino acids

Sequence
(BLAST)

001: MAGLREMEST LPPGFRFCPS DEELICFYLR NKVANHRVAS GTLVDVDLHA REPWELPEVA KLTAEEWYFF SFRDRKYATG SRTNRATKTG YWKATGKDRI
101: VHEGTTRAVV GMRKTLVFYL GRAPNGQKTT WVMHEFRLET PNSQPKEDWV LCRVFDKKKP STIEAEGGGS SGSDLFIPGA TDGSTDPSSP TTMAPLLGSS
201: PDPTVVDRFD HRSAAVPPLM VLMQGGGDQM ISGSGVHCSN NDNSGSSSAL LNLTMLQYSF LEHRPTGDDM AVGAHFGTCQ GGNNDATMAL GMGFEEHGMG
301: EIIEMEPAWR QGGSNCVYRD ELYF

Best Arabidopsis Sequence Match ( AT4G28530.1 )
(BLAST)

001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ

Arabidopsis Description

anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.