Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51708 | Canola | nucleus | 93.43 | 92.96 |
| CDY35197 | Canola | nucleus | 79.29 | 47.01 |
| CDY38380 | Canola | nucleus | 79.8 | 45.93 |
| CDY14236 | Canola | cytosol | 73.74 | 43.45 |
| AT4G28530.1 | Thale cress | nucleus | 76.77 | 43.18 |
| CDX97445 | Canola | cytosol | 73.23 | 43.15 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 21.21 | 14.19 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 20.71 | 13.95 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 20.71 | 13.85 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 16.67 | 13.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.18 | 12.41 |
| Solyc09g025310.2.1 | Tomato | nucleus | 16.67 | 12.22 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 16.67 | 11.91 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 15.66 | 11.15 |
| PGSC0003DMT400051915 | Potato | cytosol | 15.66 | 10.92 |
| Os04t0515900-01 | Rice | nucleus | 14.65 | 10.43 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 15.15 | 10.31 |
| Os10t0477600-01 | Rice | nucleus | 16.67 | 10.19 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 14.14 | 10.11 |
| EES05451 | Sorghum | nucleus | 15.15 | 9.93 |
| Os03t0109000-01 | Rice | nucleus | 14.65 | 9.76 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 14.14 | 9.56 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 13.13 | 9.52 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 14.65 | 9.48 |
| KXG26719 | Sorghum | nucleus | 13.64 | 9.31 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 13.64 | 9.09 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 13.64 | 9.09 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 13.64 | 9.06 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 14.14 | 9.0 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 14.14 | 8.97 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 14.14 | 8.89 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 12.12 | 8.79 |
| GSMUA_Achr11P... | Banana | nucleus | 11.62 | 8.78 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 13.64 | 8.74 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 13.64 | 8.71 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 13.64 | 8.68 |
| EES07725 | Sorghum | cytosol | 13.13 | 8.58 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 12.12 | 8.51 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 12.63 | 8.5 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 12.63 | 8.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.61 | 8.17 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.63 | 8.14 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 12.12 | 7.92 |
| CDY10515 | Canola | nucleus | 12.63 | 7.76 |
| Os02t0810900-01 | Rice | nucleus | 12.63 | 7.55 |
| CDY42401 | Canola | nucleus | 12.12 | 7.48 |
| GSMUA_Achr11P... | Banana | nucleus | 10.1 | 7.19 |
| CDY68680 | Canola | nucleus | 7.58 | 7.14 |
| CDY70041 | Canola | nucleus | 7.58 | 7.01 |
| CDY23558 | Canola | nucleus | 9.6 | 6.93 |
| CDX82566 | Canola | nucleus | 9.6 | 6.86 |
| CDY67593 | Canola | nucleus | 10.61 | 6.84 |
| CDY60115 | Canola | nucleus | 9.6 | 6.81 |
| CDY51910 | Canola | nucleus | 8.59 | 6.8 |
| CDY18519 | Canola | nucleus | 10.1 | 6.62 |
| CDY69369 | Canola | nucleus | 10.1 | 6.58 |
| CDX75966 | Canola | nucleus | 9.09 | 6.41 |
| CDY51941 | Canola | nucleus | 9.6 | 6.35 |
| CDY69936 | Canola | nucleus | 8.59 | 6.01 |
| CDY56940 | Canola | nucleus | 9.6 | 5.81 |
| CDY45986 | Canola | cytosol | 9.09 | 5.62 |
| CDY20411 | Canola | cytosol | 9.09 | 5.61 |
| CDY42875 | Canola | nucleus | 9.09 | 5.54 |
| CDX87602 | Canola | cytosol | 9.09 | 5.37 |
| CDX88273 | Canola | cytosol | 9.09 | 5.34 |
| CDY64672 | Canola | nucleus | 7.58 | 5.3 |
| CDX74442 | Canola | nucleus | 7.58 | 5.19 |
| CDX96262 | Canola | nucleus | 9.6 | 5.18 |
| CDY28805 | Canola | nucleus | 9.6 | 5.18 |
| CDX98529 | Canola | mitochondrion | 7.07 | 5.13 |
| CDX99695 | Canola | mitochondrion | 7.07 | 5.13 |
| CDY14030 | Canola | nucleus | 8.08 | 5.08 |
| CDY51238 | Canola | nucleus | 8.59 | 5.04 |
| CDX70804 | Canola | nucleus | 8.59 | 5.04 |
| CDY40775 | Canola | nucleus | 8.08 | 4.94 |
| CDY32316 | Canola | nucleus | 7.58 | 4.89 |
| CDY30258 | Canola | nucleus | 7.07 | 4.84 |
| CDY53250 | Canola | nucleus | 8.08 | 4.76 |
| CDY02636 | Canola | nucleus | 8.08 | 4.75 |
| CDY20314 | Canola | nucleus | 7.58 | 4.73 |
| CDX85242 | Canola | cytosol | 7.58 | 4.67 |
| CDY20103 | Canola | nucleus | 7.07 | 4.62 |
| CDX75813 | Canola | nucleus | 7.07 | 4.55 |
| CDX82444 | Canola | nucleus | 7.07 | 4.53 |
| CDX67433 | Canola | nucleus | 6.57 | 4.51 |
| CDY34773 | Canola | nucleus | 7.07 | 4.42 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 5.56 | 4.25 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 6.57 | 4.21 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 4.04 | 4.19 |
| CDY37008 | Canola | nucleus | 6.06 | 4.17 |
| CDX76817 | Canola | nucleus | 6.57 | 4.1 |
| CDY51707 | Canola | cytosol | 3.03 | 3.8 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 6.57 | 3.79 |
| CDY42901 | Canola | nucleus | 6.57 | 3.78 |
| CDX92881 | Canola | cytosol | 3.03 | 3.68 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 6.06 | 3.23 |
| CDY29982 | Canola | cytosol | 2.02 | 2.33 |
Protein Annotations
| EnsemblPlants:CDX92880 | EnsemblPlantsGene:GSBRNA2T00154719001 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF4 | ProteinID:CDX92880 | ProteinID:CDX92880.1 |
| SEG:seg | UniParc:UPI0004EF2796 | MapMan:35.2 | : | : | : |
Description
BnaC07g41380D
Coordinates
chrLK031873:-:1298990..1300111
Molecular Weight (calculated)
22581.0 Da
IEP (calculated)
5.173
GRAVY (calculated)
-0.761
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MHETARNEDW VLCRVFNKGR DLPLQDSDYN NDHQTQRFEV NDAPDLNYAP NYNNQLQPLL SSPPSTTIDP PHHHDQWEQL MKQSSRIIDH PYHHHCQHQS
101: IACGWEHMMI GSMSSSSSHG PDHESLLNLL YADKNNSVNI AADHHDKNYE KILLSSDIAS LDHDKTCMGS SFDVGMVSDL HMECAGLSFE TENLLTFS
101: IACGWEHMMI GSMSSSSSHG PDHESLLNLL YADKNNSVNI AADHHDKNYE KILLSSDIAS LDHDKTCMGS SFDVGMVSDL HMECAGLSFE TENLLTFS
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.