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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025658.1-P Field mustard nucleus 100.0 100.0
CDY30258 Canola nucleus 97.92 97.92
AT5G39610.1 Thale cress cytosol 82.7 83.86
CDX67433 Canola nucleus 82.35 82.64
CDY37008 Canola nucleus 82.01 82.29
CDY66026 Canola cytoskeleton, cytosol, nucleus 59.17 66.02
CDY29982 Canola cytosol 38.75 65.12
CDX85242 Canola cytosol 68.17 61.37
CDX86391 Canola cytoskeleton, cytosol, nucleus 64.36 60.19
CDY68680 Canola nucleus 39.1 53.81
CDY69936 Canola nucleus 51.9 53.0
CDY70041 Canola nucleus 39.1 52.8
CDY20001 Canola cytoskeleton, cytosol, nucleus 67.82 52.69
CDY64672 Canola nucleus 51.56 52.65
Solyc02g088180.2.1 Tomato cytosol 56.06 50.78
CDY51707 Canola cytosol 27.68 50.63
CDY14030 Canola nucleus 53.63 49.21
CDX92881 Canola cytosol 27.68 49.08
PGSC0003DMT400003380 Potato nucleus 54.67 48.92
CDY40775 Canola nucleus 53.98 48.15
CDY56940 Canola nucleus 53.98 47.71
CDY42875 Canola nucleus 51.9 46.15
CDX75966 Canola nucleus 39.79 40.93
CDY51910 Canola nucleus 35.29 40.8
CDY20103 Canola nucleus 41.87 39.93
CDX75813 Canola nucleus 41.87 39.29
CDX82444 Canola nucleus 41.87 39.16
CDY51941 Canola nucleus 40.48 39.13
CDX70804 Canola nucleus 45.33 38.87
CDY51238 Canola nucleus 45.33 38.87
CDY32316 Canola nucleus 41.18 38.76
CDY69369 Canola nucleus 40.48 38.49
CDY67593 Canola nucleus 40.83 38.44
CDY18519 Canola nucleus 40.14 38.41
CDY53250 Canola nucleus 44.64 38.39
CDY02636 Canola nucleus 44.29 37.98
CDY42901 Canola nucleus 44.98 37.79
CDY50879 Canola cytoskeleton, cytosol, nucleus 44.64 37.61
CDY20411 Canola cytosol 41.52 37.38
GSMUA_Achr7P11500_001 Banana nucleus 43.94 37.35
CDY45986 Canola cytosol 41.18 37.19
CDX82566 Canola nucleus 35.29 36.82
CDY20314 Canola nucleus 39.45 35.96
CDX87602 Canola cytosol 41.52 35.82
CDX96262 Canola nucleus 45.33 35.69
CDY34773 Canola nucleus 39.1 35.65
CDX76817 Canola nucleus 39.1 35.65
CDX88273 Canola cytosol 41.52 35.61
CDY28805 Canola nucleus 44.98 35.42
CDY23558 Canola nucleus 33.56 35.4
CDY60115 Canola nucleus 33.91 35.13
CDX99695 Canola mitochondrion 31.83 33.7
CDX98529 Canola mitochondrion 31.83 33.7
CDY42401 Canola nucleus 36.33 32.71
CDY10515 Canola nucleus 35.64 31.99
CDY35197 Canola nucleus 30.8 26.65
CDY14236 Canola cytosol 30.8 26.49
CDX97445 Canola cytosol 30.45 26.19
CDY38380 Canola nucleus 30.8 25.87
CDX92880 Canola nucleus 5.19 7.58
CDY51708 Canola nucleus 5.19 7.54
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078CC51UniProt:A0A078CC51EnsemblPlants:CDX74442ProteinID:CDX74442
ProteinID:CDX74442.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00114310001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR31744
PANTHER:PTHR31744:SF7SUPFAM:SSF101941UniParc:UPI0001B3727F:::
Description
BnaA04g09470DBnaA04g09470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CC51]
Coordinates
chrLK031801:+:349222..350451
Molecular Weight (calculated)
33071.2 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.556
Length
289 amino acids
Sequence
(BLAST)
001: MDYDASRIGE IVEDEEQIDL PPGFRFHPTD EELITHYLKQ KVFNTFFSAT AIGEVDLNKI EPWELPRKAK IGEKEWYFFC VRDRKYPTGL RTNRATEAGY
101: WKATGKDKEI FKGKSLVGMK KTLVFYKGRA PKGVRTNWVM HEYRLEGIYS IQHLSQTAKN DWVICRVFHK RADGTKVDMS HLMLLDSHVN RIEPVGLPSL
201: MDSSQRDSFP GSSTHVTCFS DQETEDKRLI HLESKDGSGP LFYPDPLFLT DNDSLMKLLL NSHETQFPGT GTDPSALAGM GESGCFWNF
Best Arabidopsis Sequence Match ( AT5G39610.1 )
(BLAST)
001: MDYEASRIVE MVEDEEHIDL PPGFRFHPTD EELITHYLKP KVFNTFFSAT AIGEVDLNKI EPWDLPWKAK MGEKEWYFFC VRDRKYPTGL RTNRATEAGY
101: WKATGKDKEI FKGKSLVGMK KTLVFYKGRA PKGVKTNWVM HEYRLEGKYC IENLPQTAKN EWVICRVFQK RADGTKVPMS MLDPHINRME PAGLPSLMDC
201: SQRDSFTGSS SHVTCFSDQE TEDKRLVHES KDGFGSLFYS DPLFLQDNYS LMKLLLDGQE TQFSGKPFDG RDSSGTEELD CVWNF
Arabidopsis Description
NAC92NAC domain-containing protein 92 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKA0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.