Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92881 | Canola | cytosol | 93.67 | 90.8 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 63.29 | 52.36 |
| CDY29982 | Canola | cytosol | 51.27 | 47.09 |
| Solyc09g025310.2.1 | Tomato | nucleus | 74.05 | 43.33 |
| Bra024194.1-P | Field mustard | nucleus | 95.57 | 43.02 |
| CDY35197 | Canola | nucleus | 90.51 | 42.81 |
| GSMUA_Achr11P... | Banana | nucleus | 70.89 | 42.75 |
| CDY38380 | Canola | nucleus | 91.77 | 42.15 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 73.42 | 41.88 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 77.85 | 41.84 |
| CDX97445 | Canola | cytosol | 88.61 | 41.67 |
| CDY14236 | Canola | cytosol | 88.61 | 41.67 |
| AT4G28530.1 | Thale cress | nucleus | 92.41 | 41.48 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 77.22 | 41.22 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 75.32 | 40.2 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 68.99 | 39.93 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 68.99 | 39.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.56 | 39.69 |
| GSMUA_Achr11P... | Banana | nucleus | 68.99 | 39.21 |
| PGSC0003DMT400051915 | Potato | cytosol | 70.25 | 39.08 |
| CDY68680 | Canola | nucleus | 51.9 | 39.05 |
| Os04t0515900-01 | Rice | nucleus | 67.72 | 38.49 |
| CDY70041 | Canola | nucleus | 51.9 | 38.32 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 67.09 | 38.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 69.62 | 37.93 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 67.09 | 37.59 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 68.99 | 37.46 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 64.56 | 36.69 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 66.46 | 35.84 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 67.09 | 35.81 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 67.09 | 35.69 |
| EES07725 | Sorghum | cytosol | 68.35 | 35.64 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 67.09 | 35.57 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 66.46 | 35.35 |
| KXG26719 | Sorghum | nucleus | 64.56 | 35.17 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 65.19 | 35.03 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 67.09 | 34.98 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 67.09 | 34.64 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 67.09 | 34.53 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 67.09 | 34.3 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 67.09 | 34.08 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 52.53 | 33.88 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 66.46 | 33.87 |
| EES05451 | Sorghum | nucleus | 64.56 | 33.77 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 66.46 | 33.76 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 67.09 | 33.65 |
| CDY51910 | Canola | nucleus | 53.16 | 33.6 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 65.82 | 33.33 |
| Os10t0477600-01 | Rice | nucleus | 65.19 | 31.79 |
| Os02t0810900-01 | Rice | nucleus | 66.46 | 31.72 |
| CDY23558 | Canola | nucleus | 54.43 | 31.39 |
| CDY60115 | Canola | nucleus | 55.06 | 31.18 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 50.63 | 30.89 |
| CDX82566 | Canola | nucleus | 53.8 | 30.69 |
| Os03t0109000-01 | Rice | nucleus | 57.59 | 30.64 |
| CDY64672 | Canola | nucleus | 53.16 | 29.68 |
| CDY69936 | Canola | nucleus | 51.9 | 28.98 |
| CDX67433 | Canola | nucleus | 52.53 | 28.82 |
| CDY37008 | Canola | nucleus | 51.9 | 28.47 |
| CDX75966 | Canola | nucleus | 50.63 | 28.47 |
| CDY18519 | Canola | nucleus | 53.16 | 27.81 |
| CDX74442 | Canola | nucleus | 50.63 | 27.68 |
| CDY30258 | Canola | nucleus | 50.63 | 27.68 |
| CDY69369 | Canola | nucleus | 53.16 | 27.63 |
| CDY14030 | Canola | nucleus | 54.43 | 27.3 |
| CDY51941 | Canola | nucleus | 50.63 | 26.76 |
| CDY67593 | Canola | nucleus | 51.9 | 26.71 |
| CDY40775 | Canola | nucleus | 54.43 | 26.54 |
| CDY42401 | Canola | nucleus | 53.8 | 26.48 |
| CDY10515 | Canola | nucleus | 53.8 | 26.4 |
| CDY56940 | Canola | nucleus | 54.43 | 26.3 |
| CDX76817 | Canola | nucleus | 51.9 | 25.87 |
| CDY34773 | Canola | nucleus | 51.9 | 25.87 |
| CDY20314 | Canola | nucleus | 51.9 | 25.87 |
| CDY42875 | Canola | nucleus | 53.16 | 25.85 |
| CDX85242 | Canola | cytosol | 51.9 | 25.55 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 49.37 | 25.24 |
| CDY20103 | Canola | nucleus | 48.1 | 25.08 |
| CDX70804 | Canola | nucleus | 52.53 | 24.63 |
| CDY51238 | Canola | nucleus | 52.53 | 24.63 |
| CDY20411 | Canola | cytosol | 50.0 | 24.61 |
| CDY32316 | Canola | nucleus | 47.47 | 24.43 |
| CDY45986 | Canola | cytosol | 49.37 | 24.38 |
| CDX75813 | Canola | nucleus | 47.47 | 24.35 |
| CDX82444 | Canola | nucleus | 47.47 | 24.27 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 52.53 | 24.2 |
| CDX87602 | Canola | cytosol | 51.27 | 24.18 |
| CDY53250 | Canola | nucleus | 51.27 | 24.11 |
| CDY02636 | Canola | nucleus | 51.27 | 24.04 |
| CDX88273 | Canola | cytosol | 51.27 | 24.04 |
| CDY42901 | Canola | nucleus | 51.27 | 23.55 |
| CDX96262 | Canola | nucleus | 52.53 | 22.62 |
| CDY28805 | Canola | nucleus | 52.53 | 22.62 |
| CDX99695 | Canola | mitochondrion | 37.97 | 21.98 |
| CDX98529 | Canola | mitochondrion | 37.97 | 21.98 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 50.63 | 21.51 |
| CDX92880 | Canola | nucleus | 3.8 | 3.03 |
| CDY51708 | Canola | nucleus | 3.8 | 3.02 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IP50 | UniProt:A0A078IP50 | EnsemblPlants:CDY51707 | ProteinID:CDY51707 |
| ProteinID:CDY51707.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00004056001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EDDEC2 | : | : | : |
Description
BnaA03g58970DBnaA03g58970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP50]
Coordinates
chrLK033020:+:61427..65011
Molecular Weight (calculated)
18491.2 Da
IEP (calculated)
9.720
GRAVY (calculated)
-0.651
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLYN KIRAKSDHGD GATDLVEIDL HICEPWQLPD VAKLNAKEWY FFSFRDRKYA TGYRTNRATV SGYWKATGKD
101: RTVMDPRTSQ LVGMRKTLVF YRNRAPNGIK TTWIMHEFRL ECPNMPPKYV ERVTNLCR
101: RTVMDPRTSQ LVGMRKTLVF YRNRAPNGIK TTWIMHEFRL ECPNMPPKYV ERVTNLCR
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.