Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 93.16 | 90.79 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 87.95 | 87.1 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 79.48 | 86.52 |
| Os04t0515900-01 | Rice | nucleus | 67.1 | 74.1 |
| CDY51707 | Canola | cytosol | 34.53 | 67.09 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 64.5 | 66.67 |
| KXG26719 | Sorghum | nucleus | 62.22 | 65.86 |
| CDX92881 | Canola | cytosol | 34.2 | 64.42 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 60.26 | 63.14 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 54.4 | 61.17 |
| GSMUA_Achr11P... | Banana | nucleus | 51.14 | 59.92 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 36.81 | 59.16 |
| GSMUA_Achr11P... | Banana | nucleus | 51.79 | 57.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.75 | 56.9 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 49.84 | 56.04 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 50.49 | 53.26 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 46.25 | 51.26 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 46.25 | 51.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.67 | 50.97 |
| Solyc09g025310.2.1 | Tomato | nucleus | 42.67 | 48.52 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 47.88 | 47.57 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 45.6 | 47.14 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 44.95 | 46.62 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 42.02 | 46.57 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 44.3 | 46.26 |
| Solyc06g008360.2.1 | Tomato | nucleus | 42.35 | 46.1 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 44.3 | 45.95 |
| PGSC0003DMT400065559 | Potato | nucleus | 42.02 | 45.74 |
| PGSC0003DMT400051915 | Potato | cytosol | 41.37 | 44.72 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 34.53 | 43.27 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 27.04 | 38.97 |
| CDY35197 | Canola | nucleus | 41.04 | 37.72 |
| CDY38380 | Canola | nucleus | 41.37 | 36.92 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 34.53 | 36.81 |
| Bra011037.1-P | Field mustard | nucleus | 41.04 | 36.63 |
| AT4G28530.1 | Thale cress | nucleus | 41.69 | 36.36 |
| CDY14236 | Canola | cytosol | 39.74 | 36.31 |
| CDX97445 | Canola | cytosol | 39.41 | 36.01 |
| Bra024194.1-P | Field mustard | nucleus | 41.04 | 35.9 |
| Bra010362.1-P | Field mustard | nucleus | 40.39 | 35.73 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 32.9 | 34.59 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 34.2 | 34.2 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 33.55 | 33.55 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 33.22 | 33.44 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 30.62 | 31.44 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 26.06 | 29.3 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 31.27 | 28.74 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 32.57 | 28.41 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 32.25 | 28.21 |
| TraesCS2B01G343600.1 | Wheat | nucleus | 32.25 | 27.97 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 30.62 | 27.57 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 31.27 | 27.35 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 31.92 | 27.07 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 22.48 | 25.75 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 29.32 | 25.21 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 28.34 | 25.07 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 29.97 | 25.0 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 26.06 | 24.77 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 28.01 | 24.09 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 29.97 | 23.71 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 28.99 | 22.19 |
| CDX92880 | Canola | nucleus | 8.14 | 12.63 |
| CDY51708 | Canola | nucleus | 8.14 | 12.56 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G399700.1 | EnsemblPlantsGene:TraesCS2B01G399700 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF4 | PFAM:PF02365 | PFscan:PS51005 | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr2B:+:568030274..568032240
Molecular Weight (calculated)
34420.8 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.426
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLREIESTL PPGFRFYPSD QELVCHYLYK KVTNERASQG TLVEVDLHAR EPWELPDVAK LTASEWYFFS FRDRKYATGS RTNRATKTGY WKATGKDREV
101: RSPATRAVVG MRKTLVFYQG RAPNGSKTSW VMHEFRLDSP HLPPRVRITC RTLQVYLLFA IASAGVSNLD AILQEDWVLC RVFQKQKLDG EQDNARSSSP
201: TFARSSQVAQ ELPVMDASGD QMMGSGAAGF VAPRQEELIC GPNPLMNAAM WQQYNSLLLD QYPQEEMAGS SPMMATGGAG DECGFFFDSG FEDTATLGTM
301: RFPQAWS
101: RSPATRAVVG MRKTLVFYQG RAPNGSKTSW VMHEFRLDSP HLPPRVRITC RTLQVYLLFA IASAGVSNLD AILQEDWVLC RVFQKQKLDG EQDNARSSSP
201: TFARSSQVAQ ELPVMDASGD QMMGSGAAGF VAPRQEELIC GPNPLMNAAM WQQYNSLLLD QYPQEEMAGS SPMMATGGAG DECGFFFDSG FEDTATLGTM
301: RFPQAWS
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.