Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 94.12 | 87.11 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 93.5 | 86.53 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 81.73 | 76.3 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 63.16 | 74.73 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 69.04 | 62.47 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 66.87 | 60.5 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 61.61 | 57.35 |
| EES02626 | Sorghum | cytosol | 23.84 | 53.85 |
| CDY29982 | Canola | cytosol | 27.86 | 52.33 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 34.37 | 52.11 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 37.15 | 48.78 |
| GSMUA_Achr10P... | Banana | cytosol | 32.2 | 45.61 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 38.08 | 40.2 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 39.32 | 39.69 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 37.77 | 39.61 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 38.08 | 38.68 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 31.89 | 38.43 |
| Os01t0393100-01 | Rice | nucleus | 38.7 | 38.11 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 40.56 | 37.86 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 39.32 | 37.24 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 39.94 | 37.18 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 34.06 | 36.79 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 21.67 | 36.65 |
| CDY02636 | Canola | nucleus | 37.46 | 35.91 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 32.51 | 35.84 |
| CDY53250 | Canola | nucleus | 37.15 | 35.71 |
| Bra023669.1-P | Field mustard | nucleus | 37.15 | 35.71 |
| AT5G18270.1 | Thale cress | nucleus | 36.22 | 34.93 |
| CDX70804 | Canola | nucleus | 36.22 | 34.72 |
| Bra006449.1-P | Field mustard | nucleus | 35.91 | 34.52 |
| Bra002148.1-P | Field mustard | nucleus | 35.91 | 34.52 |
| CDY51238 | Canola | nucleus | 35.91 | 34.42 |
| AT3G04060.1 | Thale cress | nucleus | 35.6 | 34.02 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 35.91 | 33.82 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 35.91 | 33.72 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 34.67 | 33.53 |
| CDY42901 | Canola | nucleus | 35.6 | 33.43 |
| Bra040153.1-P | Field mustard | nucleus | 34.37 | 32.36 |
| KRG94783 | Soybean | nucleus | 40.56 | 32.35 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 36.84 | 32.34 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 34.67 | 31.82 |
| TraesCS2B01G343600.1 | Wheat | nucleus | 34.67 | 31.64 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 28.48 | 31.51 |
| KRH06738 | Soybean | nucleus | 39.63 | 31.45 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 39.01 | 31.27 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 27.86 | 31.25 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 37.77 | 31.2 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 29.41 | 31.15 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 29.41 | 30.94 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 33.44 | 30.77 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 28.79 | 30.29 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 32.82 | 30.2 |
| OQU89451 | Sorghum | cytosol | 34.67 | 30.11 |
| EES02651 | Sorghum | nucleus | 36.84 | 29.75 |
| EES17917 | Sorghum | cytosol | 36.84 | 29.6 |
| KRH08479 | Soybean | nucleus | 37.46 | 29.51 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 36.53 | 29.43 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 33.75 | 29.38 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 32.82 | 29.28 |
| KRH70130 | Soybean | nucleus | 36.84 | 29.02 |
| Zm00001d008403_P001 | Maize | plastid | 28.79 | 28.88 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 25.39 | 27.61 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 26.01 | 27.18 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 32.2 | 26.8 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 24.77 | 26.06 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 39.94 | 25.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7B01G100300 | EnsemblPlants:TraesCS7B01G100300.1 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:114939022..114940600
Molecular Weight (calculated)
36455.0 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.417
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVHLQVQQQ KHLNLPAGFR FHPTDLEIIT FYLVRKVLKK PFDVIVIEEV DLNKCEPWDL PNNVNMGEKD QYFFSKKDLK YPTGVRTNWA TNAGYWKATG
101: KDKEILHPPT MSLIGMKKTL VFYKGRAPRG EKTNWIMHEY RLEMGKQHTP DLPTDIVRAA SINGSSKEEY VVCRIFHKST GLKKVVTPSY SIPIPMSMGA
201: EQQQGFLESN TLAPLMDYDV PSSLEPLSPL PATSLYQMHN FGAGSSMMGS AVLPMMNNQY FENHRHQMMV APPQSSMSFY NNQQQQMMHM SAEQGFMVGV
301: DPGSGTSSIV SHEDVLTGTS NNI
101: KDKEILHPPT MSLIGMKKTL VFYKGRAPRG EKTNWIMHEY RLEMGKQHTP DLPTDIVRAA SINGSSKEEY VVCRIFHKST GLKKVVTPSY SIPIPMSMGA
201: EQQQGFLESN TLAPLMDYDV PSSLEPLSPL PATSLYQMHN FGAGSSMMGS AVLPMMNNQY FENHRHQMMV APPQSSMSFY NNQQQQMMHM SAEQGFMVGV
301: DPGSGTSSIV SHEDVLTGTS NNI
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.