Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0854800-03 | |
| Os10t0577800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Os03t0854800-03 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Os10t0577800-01 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 85.98 | 88.12 |
| CDY29982 | Canola | cytosol | 31.4 | 59.88 |
| EES02626 | Sorghum | cytosol | 24.7 | 56.64 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 35.06 | 53.74 |
| GSMUA_Achr10P... | Banana | cytosol | 37.2 | 53.51 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 35.06 | 53.0 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 34.15 | 52.58 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 34.15 | 49.78 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 36.59 | 48.78 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 35.67 | 42.86 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 37.8 | 42.32 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 42.99 | 39.5 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 42.68 | 39.33 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 42.68 | 39.33 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 38.72 | 39.32 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 36.89 | 39.29 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 38.11 | 38.7 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 37.5 | 38.68 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 35.98 | 38.56 |
| Os07t0684800-01 | Rice | cytosol | 35.37 | 38.54 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 39.94 | 38.53 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 41.46 | 38.42 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 40.24 | 38.04 |
| CDY53250 | Canola | nucleus | 38.41 | 37.5 |
| Bra023669.1-P | Field mustard | nucleus | 38.41 | 37.5 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 39.63 | 37.46 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 30.49 | 37.31 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 40.55 | 37.25 |
| CDY02636 | Canola | nucleus | 38.11 | 37.09 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 40.85 | 37.02 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 39.02 | 36.68 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 35.98 | 36.53 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 41.16 | 36.49 |
| AT5G18270.1 | Thale cress | nucleus | 37.2 | 36.42 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 38.41 | 36.42 |
| Bra006449.1-P | Field mustard | nucleus | 37.2 | 36.31 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 36.28 | 36.28 |
| CDX70804 | Canola | nucleus | 37.2 | 36.2 |
| CDY51238 | Canola | nucleus | 37.2 | 36.2 |
| Os04t0460600-02 | Rice | cytosol, mitochondrion, nucleus | 37.8 | 36.15 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 38.41 | 36.1 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 38.41 | 36.1 |
| AT3G04060.1 | Thale cress | nucleus | 37.2 | 36.09 |
| Os09t0497900-01 | Rice | cytosol | 38.72 | 36.08 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 41.46 | 35.79 |
| CDY42901 | Canola | nucleus | 37.2 | 35.47 |
| Bra002148.1-P | Field mustard | nucleus | 36.28 | 35.42 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 36.89 | 35.28 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 40.85 | 35.26 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 36.59 | 34.88 |
| OQU89451 | Sorghum | cytosol | 39.02 | 34.41 |
| Os03t0327100-01 | Rice | nucleus | 37.5 | 34.36 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 36.59 | 34.29 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 40.85 | 34.27 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 39.02 | 33.95 |
| Os02t0579000-01 | Rice | mitochondrion | 35.67 | 33.91 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 35.67 | 33.81 |
| Bra040153.1-P | Field mustard | nucleus | 35.06 | 33.53 |
| EES02651 | Sorghum | nucleus | 40.55 | 33.25 |
| EES17917 | Sorghum | cytosol | 40.55 | 33.08 |
| Os06t0675600-01 | Rice | nucleus | 30.49 | 32.89 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 37.2 | 32.88 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 37.2 | 32.71 |
| Os08t0511200-00 | Rice | cytosol | 34.15 | 32.28 |
| Os08t0200600-01 | Rice | nucleus | 28.35 | 31.74 |
| KRH06738 | Soybean | nucleus | 39.33 | 31.7 |
| KRG94783 | Soybean | nucleus | 39.02 | 31.6 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 38.72 | 31.51 |
| Os04t0515900-01 | Rice | nucleus | 26.52 | 31.3 |
| Os12t0123800-01 | Rice | nucleus | 37.5 | 31.06 |
| Zm00001d008403_P001 | Maize | plastid | 30.49 | 31.06 |
| KRH08479 | Soybean | nucleus | 38.11 | 30.49 |
| KRH70130 | Soybean | nucleus | 36.59 | 29.27 |
| Os12t0610600-01 | Rice | nucleus | 29.57 | 29.13 |
| Os03t0109000-01 | Rice | nucleus | 25.91 | 28.62 |
| Os11t0127000-01 | Rice | nucleus | 23.78 | 26.44 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 41.46 | 26.36 |
| Os02t0810900-01 | Rice | nucleus | 26.52 | 26.28 |
| Os10t0477600-01 | Rice | nucleus | 25.61 | 25.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:BAD68974.1 | ProteinID:BAF05033.1 | ProteinID:BAS72293.1 | EMBL:EU846995 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | EnsemblPlantsGene:Os01g0393100 | EnsemblPlants:Os01t0393100-01 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF23 | UniProt:Q5VNK1 | SUPFAM:SSF101941 | UniParc:UPI0000457FF1 | SEG:seg | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 26Similar to CUC2. (Os01t0393100-01)
Coordinates
chr1:-:16720752..16722617
Molecular Weight (calculated)
36962.3 Da
IEP (calculated)
7.602
GRAVY (calculated)
-0.627
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEQQQQVER QPDLPPGFRF HPTDEEIITF YLAPKVVDSR GFCVAAIGEV DLNKCEPWDL PGKAKMNGEK EWYFYCQKDR KYPTGMRTNR ATEAGYWKAT
101: GKDKEIFRNH HMLIGMKKTL VFYKGRAPKG DKTNWVMHEY RLADASPPQP PPPPSSAEPP RQDDWAVCRI FHKSSGIKKP VQVPMQMPMQ MQMPVAHQVP
201: AANYQQQMAM ASASIIQVPM QMQMPSMSDQ LQMLDDFSTG SLMAPPPPPP SYSTLPGFPL QINGGAQQFV GNPSMYYQQQ QQQQQQQMDM AAGGFVVSEP
301: SSLVVSPQAT WTLPSGSTDT YIHTYIHT
101: GKDKEIFRNH HMLIGMKKTL VFYKGRAPKG DKTNWVMHEY RLADASPPQP PPPPSSAEPP RQDDWAVCRI FHKSSGIKKP VQVPMQMPMQ MQMPVAHQVP
201: AANYQQQMAM ASASIIQVPM QMQMPSMSDQ LQMLDDFSTG SLMAPPPPPP SYSTLPGFPL QINGGAQQFV GNPSMYYQQQ QQQQQQQMDM AAGGFVVSEP
301: SSLVVSPQAT WTLPSGSTDT YIHTYIHT
001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.