Factsheet for HORVU4Hr1G089450.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT3G04060.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT3G04060.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G189900.1	Wheat	nucleus	67.14	72.76
HORVU7Hr1G039700.1	Barley	nucleus	71.43	72.25
TraesCS7B01G094000.1	Wheat	nucleus	56.0	71.79
TraesCS7A01G189200.1	Wheat	nucleus	71.14	71.35
HORVU7Hr1G031260.1	Barley	nucleus	67.14	66.38
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	64.86	60.21
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	58.86	55.68
EES02626	Sorghum	cytosol	21.71	53.15
CDY29982	Canola	cytosol	26.0	52.91
HORVU3Hr1G014090.1	Barley	nucleus	32.29	52.07
GSMUA_Achr5P07600_001	Banana	cytosol	32.57	46.34
GSMUA_Achr10P...	Banana	cytosol	28.86	44.3
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	27.71	41.28
HORVU2Hr1G017360.1	Barley	nucleus	17.43	40.13
GSMUA_Achr7P18330_001	Banana	nucleus	34.86	39.61
GSMUA_Achr9P16920_001	Banana	cytosol	34.57	39.54
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	35.14	38.44
GSMUA_Achr3P09520_001	Banana	cytosol	33.71	37.11
GSMUA_Achr6P32290_001	Banana	nucleus	36.57	36.99
HORVU4Hr1G051360.3	Barley	nucleus	36.29	36.71
Os01t0393100-01	Rice	nucleus	34.29	36.59
GSMUA_Achr6P08600_001	Banana	nucleus	36.0	36.31
GSMUA_Achr3P18020_001	Banana	nucleus	29.14	34.81
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	29.71	34.78
CDY02636	Canola	nucleus	32.86	34.12
CDY53250	Canola	nucleus	32.57	33.93
Bra023669.1-P	Field mustard	nucleus	32.57	33.93
CDX70804	Canola	nucleus	32.57	33.83
Bra006449.1-P	Field mustard	nucleus	32.29	33.63
Bra002148.1-P	Field mustard	nucleus	32.29	33.63
CDY51238	Canola	nucleus	32.29	33.53
AT5G18270.1	Thale cress	nucleus	31.71	33.13
AT3G04060.1	Thale cress	nucleus	31.71	32.84
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	36.57	32.74
CDY50879	Canola	cytoskeleton, cytosol, nucleus	31.14	31.78
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	31.14	31.69
Zm00001d008403_P001	Maize	plastid	29.14	31.68
VIT_08s0007g07640.t01	Wine grape	nucleus	36.29	31.51
EES02651	Sorghum	nucleus	36.0	31.5
Bra040153.1-P	Field mustard	nucleus	30.86	31.49
CDY42901	Canola	nucleus	30.86	31.4
KRG94783	Soybean	nucleus	36.29	31.36
HORVU5Hr1G074810.1	Barley	nucleus	32.29	31.13
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	32.86	31.0
HORVU7Hr1G106480.1	Barley	nucleus	27.14	30.94
OQU89451	Sorghum	cytosol	32.57	30.65
KRH06738	Soybean	nucleus	35.43	30.47
EES17917	Sorghum	cytosol	34.0	29.6
KRH08479	Soybean	nucleus	34.29	29.27
HORVU2Hr1G089210.4	Barley	cytosol, mitochondrion, nucleus	23.43	29.08
HORVU2Hr1G103930.1	Barley	mitochondrion	24.29	28.81
KRH70130	Soybean	nucleus	33.71	28.78
HORVU2Hr1G017400.3	Barley	nucleus	31.14	28.46
HORVU7Hr1G072670.3	Barley	cytosol, plastid	26.86	27.57
HORVU2Hr1G017350.1	Barley	nucleus	30.86	27.2
HORVU0Hr1G017490.7	Barley	nucleus	24.0	27.01
HORVU2Hr1G080460.8	Barley	plastid	31.14	26.65
HORVU7Hr1G082420.2	Barley	nucleus	29.43	26.28
HORVU7Hr1G106660.9	Barley	nucleus, plastid	27.14	26.17
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	31.14	25.65
HORVU5Hr1G045640.7	Barley	mitochondrion	32.86	25.27
GSMUA_Achr8P21470_001	Banana	nucleus	36.29	24.61

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:F6IAY0	EMBL:FR819761	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G089450	EnsemblPlants:HORVU4Hr1G089450.1	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	SUPFAM:SSF101941
UniParc:UPI0002116FAC	SEG:seg	:	:	:	:

Description

NAC transcription factor [Source:UniProtKB/TrEMBL;Acc:F6IAY0]

Coordinates

chrchr4H:+:642496560..642498144

Molecular Weight (calculated)

38969.8 Da

IEP (calculated)

7.806

GRAVY (calculated)

-0.414

Length

350 amino acids

Sequence
(BLAST)

001: MASHLQVQQQ KQQLNLPPGF RFHPTDMEII IFYLVPKVLK KAFDKTVVGE VDLKKYEPWN LPNEVNMGEK DRYFFSQKDL KYPTGIRTNR ATNAGYWKAT
101: GKDKAILLPA TTTLIGMKKT LVFYKGRAPR GEKTNWIMHE YRIEIGKQPT PDLPADITEA ATINASSKEE YVVCKIFHKS TGPKKVVMSS YALPIPISMG
201: ADQHQGFPES TTLAPLMDYD VFSSLAPPPP LSAASVYQMH AIEAGSSMMG SVVFPMMNND YFGNNHHQMM ATPPQSTMSF NNHNQHQQMM HMSANRGFMA
301: GVDPGSSSSC IASQEDVMTG LSNNNHGYVG ASMSDEISSV NMGMDGMWNY

Best Arabidopsis Sequence Match ( AT3G18400.1 )
(BLAST)

001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW

Arabidopsis Description

anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.