Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G118500.1 | Wheat | cytosol | 82.25 | 89.49 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 82.25 | 89.24 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 80.94 | 87.82 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 79.11 | 76.32 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 44.65 | 72.77 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 28.72 | 72.37 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 77.02 | 69.41 |
| Os07t0684800-01 | Rice | cytosol | 47.0 | 59.8 |
| EER97754 | Sorghum | nucleus | 51.7 | 59.46 |
| CDY29982 | Canola | cytosol | 26.63 | 59.3 |
| Zm00001d022517_P001 | Maize | nucleus | 47.26 | 56.92 |
| GSMUA_Achr10P... | Banana | cytosol | 31.33 | 52.63 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 32.9 | 51.22 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 45.43 | 50.29 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 36.29 | 47.44 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 26.63 | 47.0 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 35.51 | 44.44 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 34.99 | 42.14 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 33.16 | 41.23 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 36.81 | 40.75 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 35.77 | 39.48 |
| CDY53250 | Canola | nucleus | 34.2 | 38.99 |
| CDY02636 | Canola | nucleus | 34.2 | 38.87 |
| Bra002148.1-P | Field mustard | nucleus | 33.94 | 38.69 |
| Bra023669.1-P | Field mustard | nucleus | 33.94 | 38.69 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 30.03 | 38.46 |
| AT3G04060.1 | Thale cress | nucleus | 33.94 | 38.46 |
| AT5G18270.1 | Thale cress | nucleus | 33.42 | 38.21 |
| Bra006449.1-P | Field mustard | nucleus | 33.42 | 38.1 |
| CDY51238 | Canola | nucleus | 33.42 | 37.98 |
| CDX70804 | Canola | nucleus | 33.42 | 37.98 |
| KRG94783 | Soybean | nucleus | 39.43 | 37.28 |
| KRH06738 | Soybean | nucleus | 39.43 | 37.1 |
| Bra040153.1-P | Field mustard | nucleus | 32.64 | 36.44 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 32.38 | 36.15 |
| CDY42901 | Canola | nucleus | 32.38 | 36.05 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 32.11 | 35.76 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 37.08 | 35.24 |
| KRH70130 | Soybean | nucleus | 37.08 | 34.63 |
| KRH08479 | Soybean | nucleus | 36.81 | 34.39 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 27.42 | 34.2 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 25.07 | 34.04 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 31.59 | 33.33 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 25.59 | 33.22 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 30.55 | 33.05 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 28.46 | 31.5 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 28.46 | 31.14 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 30.03 | 31.08 |
| HORVU2Hr1G080460.8 | Barley | plastid | 32.38 | 30.32 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 26.63 | 29.91 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 24.02 | 29.58 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 28.98 | 29.44 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 27.68 | 29.2 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 28.72 | 28.06 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 36.55 | 27.13 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 29.5 | 24.84 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287H7J6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU2Hr1G017400 | EnsemblPlants:HORVU2Hr1G017400.3 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 | UniParc:UPI000B465966 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:41955434..41957527
Molecular Weight (calculated)
41780.0 Da
IEP (calculated)
5.632
GRAVY (calculated)
-0.526
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVTEVMDL GAEEPRLSLP PGFRFHPTDE EVVTHYLTPK AVNNSFSCLV IADVDLNKTE PWDLPGEYYC SSSSGSIGFA GREAHGGGFA GKAKMGEKEW
101: YFFVHKDRKY PTGTRTNRAT ERGYWKATGK DKEIFRGKGR DAVLVGMKKT LVFYTGRAPR GDKTPYVMHE YRLEGQLPHR LHRSAKNDWA VCRVFDKDLA
201: AKNAPQVPPP PAAAGAMEDP YAFLDDFLNN PDLPMLMDSP SGADDFAAAS SSTSSAALPL EPDTEQLTIK TEPPVTQQQM QSPNYFFMPA TTGSGNHGGG
301: AGYSPYLQGA MGGDQQAAIR RHCKPEAASS SALLQTPSLG FFDTGALAGA ADTSFPMMPS SRSYVDLEQL CRGEPPMDFS NMW
101: YFFVHKDRKY PTGTRTNRAT ERGYWKATGK DKEIFRGKGR DAVLVGMKKT LVFYTGRAPR GDKTPYVMHE YRLEGQLPHR LHRSAKNDWA VCRVFDKDLA
201: AKNAPQVPPP PAAAGAMEDP YAFLDDFLNN PDLPMLMDSP SGADDFAAAS SSTSSAALPL EPDTEQLTIK TEPPVTQQQM QSPNYFFMPA TTGSGNHGGG
301: AGYSPYLQGA MGGDQQAAIR RHCKPEAASS SALLQTPSLG FFDTGALAGA ADTSFPMMPS SRSYVDLEQL CRGEPPMDFS NMW
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.