Factsheet for HORVU2Hr1G017360.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT3G04060.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT3G04060.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29982	Canola	cytosol	45.39	40.12
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	59.21	38.3
HORVU2Hr1G017350.1	Barley	nucleus	98.03	37.53
GSMUA_Achr10P...	Banana	cytosol	48.68	32.46
TraesCS2B01G118200.1	Wheat	cytosol, nucleus, plastid	70.39	30.48
HORVU3Hr1G014090.1	Barley	nucleus	43.42	30.41
TraesCS2B01G118400.1	Wheat	cytosol, nucleus, plastid	68.42	29.63
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	73.68	29.32
GSMUA_Achr5P07600_001	Banana	cytosol	46.71	28.86
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	65.79	28.74
HORVU2Hr1G017400.3	Barley	nucleus	72.37	28.72
TraesCS2D01G100600.1	Wheat	cytosol, nucleus, plastid	67.76	27.99
Os07t0684800-01	Rice	cytosol	55.26	27.91
GSMUA_Achr3P18020_001	Banana	nucleus	52.63	27.3
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	74.34	26.59
TraesCS2B01G118300.1	Wheat	cytosol	65.79	25.77
EER97754	Sorghum	nucleus	55.26	25.23
Zm00001d022517_P001	Maize	nucleus	52.63	25.16
TraesCS2D01G100700.1	Wheat	cytosol, endoplasmic reticulum, nucleus	69.08	24.59
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	47.37	24.08
HORVU4Hr1G051360.3	Barley	nucleus	51.97	22.83
GSMUA_Achr9P16920_001	Banana	cytosol	45.39	22.55
GSMUA_Achr7P18330_001	Banana	nucleus	45.39	22.4
GSMUA_Achr6P32290_001	Banana	nucleus	49.34	21.68
AT5G18270.1	Thale cress	nucleus	46.71	21.19
Bra023669.1-P	Field mustard	nucleus	46.71	21.13
CDY53250	Canola	nucleus	46.71	21.13
GSMUA_Achr3P09520_001	Banana	cytosol	44.08	21.07
CDY02636	Canola	nucleus	46.71	21.07
AT3G04060.1	Thale cress	nucleus	46.71	21.01
CDY50879	Canola	cytoskeleton, cytosol, nucleus	47.37	20.99
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	47.37	20.93
CDX70804	Canola	nucleus	46.05	20.77
CDY51238	Canola	nucleus	46.05	20.77
Bra006449.1-P	Field mustard	nucleus	45.39	20.54
GSMUA_Achr6P08600_001	Banana	nucleus	46.71	20.46
CDY42901	Canola	nucleus	46.05	20.35
Bra002148.1-P	Field mustard	nucleus	44.74	20.24
HORVU2Hr1G103930.1	Barley	mitochondrion	38.82	20.0
HORVU7Hr1G106480.1	Barley	nucleus	40.13	19.87
Bra040153.1-P	Field mustard	nucleus	44.08	19.53
KRG94783	Soybean	nucleus	51.97	19.51
HORVU5Hr1G074810.1	Barley	nucleus	46.05	19.28
KRH06738	Soybean	nucleus	51.32	19.16
HORVU2Hr1G089210.4	Barley	cytosol, mitochondrion, nucleus	34.87	18.79
VIT_08s0007g07640.t01	Wine grape	nucleus	49.34	18.61
HORVU7Hr1G031260.1	Barley	nucleus	42.76	18.36
KRH70130	Soybean	nucleus	49.34	18.29
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	44.08	18.11
KRH08479	Soybean	nucleus	48.68	18.05
HORVU7Hr1G039700.1	Barley	nucleus	40.79	17.92
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	44.08	17.77
HORVU0Hr1G017490.7	Barley	nucleus	36.18	17.68
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	40.13	17.43
HORVU2Hr1G080460.8	Barley	plastid	46.71	17.36
HORVU7Hr1G072670.3	Barley	cytosol, plastid	38.82	17.3
HORVU7Hr1G106660.9	Barley	nucleus, plastid	40.13	16.8
HORVU7Hr1G082420.2	Barley	nucleus	40.79	15.82
HORVU5Hr1G045640.7	Barley	mitochondrion	46.71	15.6
GSMUA_Achr8P21470_001	Banana	nucleus	50.66	14.92

Protein Annotations

EnsemblPlants:HORVU2Hr1G017360.1	EnsemblPlantsGene:HORVU2Hr1G017360	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PANTHER:PTHR31744
PANTHER:PTHR31744:SF23	PFAM:PF02365	PFscan:PS51005	SUPFAM:SSF101941	MapMan:15.5.17	:

Description

No Description!

Coordinates

chrchr2H:-:40902535..40902992

Molecular Weight (calculated)

16917.1 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.280

Length

152 amino acids

Sequence
(BLAST)

001: XAMSDVTAVM DLGVEEPQLS LPPGFRFHPT DEEVVTDYLT RKVLHESFSC QVITDVDLNK NEPWDLPGEC SGVLLVYSST RASFFDLICS TLMAGSCFSA
101: GLAKMGEKEW FFFVHKSRKY PTGTRTNRAT ERGHWKATGK DKEIYRGKVL VG

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.