Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G176000.1 | Wheat | nucleus | 91.33 | 92.4 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 91.33 | 92.4 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 90.75 | 92.08 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 74.28 | 73.85 |
| EER92328 | Sorghum | cytosol | 75.14 | 73.03 |
| Zm00001d028995_P001 | Maize | cytosol | 73.7 | 72.65 |
| Os03t0327100-01 | Rice | nucleus | 73.99 | 71.51 |
| CDY29982 | Canola | cytosol | 31.79 | 63.95 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 39.02 | 57.45 |
| GSMUA_Achr10P... | Banana | cytosol | 35.55 | 53.95 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 38.15 | 53.66 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 22.83 | 51.97 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 31.5 | 50.23 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 44.22 | 50.0 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 47.98 | 47.84 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 47.4 | 47.4 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 41.91 | 47.08 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 42.77 | 46.54 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 38.73 | 45.73 |
| CDY02636 | Canola | nucleus | 44.51 | 45.7 |
| CDY53250 | Canola | nucleus | 44.22 | 45.54 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 50.29 | 45.43 |
| Bra023669.1-P | Field mustard | nucleus | 43.93 | 45.24 |
| Bra002148.1-P | Field mustard | nucleus | 43.64 | 44.94 |
| CDX70804 | Canola | nucleus | 43.64 | 44.81 |
| Bra006449.1-P | Field mustard | nucleus | 43.35 | 44.64 |
| CDY51238 | Canola | nucleus | 43.35 | 44.51 |
| AT5G18270.1 | Thale cress | nucleus | 42.77 | 44.18 |
| AT3G04060.1 | Thale cress | nucleus | 42.77 | 43.79 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 42.77 | 43.02 |
| Bra040153.1-P | Field mustard | nucleus | 42.49 | 42.86 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 49.13 | 42.82 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 42.2 | 42.57 |
| CDY42901 | Canola | nucleus | 41.62 | 41.86 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 47.4 | 40.69 |
| KRG94783 | Soybean | nucleus | 47.4 | 40.49 |
| KRH06738 | Soybean | nucleus | 47.11 | 40.05 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 34.39 | 39.8 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 48.84 | 39.76 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 38.73 | 37.85 |
| KRH08479 | Soybean | nucleus | 44.51 | 37.56 |
| KRH70130 | Soybean | nucleus | 43.93 | 37.07 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 36.71 | 36.71 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 36.71 | 36.29 |
| HORVU5Hr1G074810.1 | Barley | nucleus | 35.55 | 33.88 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 35.84 | 33.51 |
| HORVU2Hr1G103930.1 | Barley | mitochondrion | 28.32 | 33.22 |
| HORVU2Hr1G080460.8 | Barley | plastid | 39.02 | 33.01 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 26.88 | 32.98 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 35.26 | 32.36 |
| HORVU7Hr1G106480.1 | Barley | nucleus | 28.61 | 32.25 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 34.39 | 30.36 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 26.3 | 29.26 |
| HORVU7Hr1G072670.3 | Barley | cytosol, plastid | 28.61 | 29.03 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 36.99 | 28.13 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 41.33 | 27.71 |
| HORVU7Hr1G106660.9 | Barley | nucleus, plastid | 28.61 | 27.27 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:F6IAY2 | EMBL:FR819763 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU4Hr1G051360 | EnsemblPlants:HORVU4Hr1G051360.3 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 | SUPFAM:SSF101941 |
| UniParc:UPI0002116FAE | SEG:seg | : | : | : | : |
Description
NAC transcription factor [Source:UniProtKB/TrEMBL;Acc:F6IAY2]
Coordinates
chrchr4H:-:421671811..421673949
Molecular Weight (calculated)
37989.8 Da
IEP (calculated)
6.236
GRAVY (calculated)
-0.458
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVSVINQA TEVEDAAAGL DLPPGFRFHP TDEEIISHYL TPKALDHRFC SGVIGEVDLN KCEPWHLPGK AKMGEKEWYF FCHKDRKYPT GTRTNRATMS
101: GYWKATGKDK EIFRGRGILV GMKKTLVFYL GRAPRGEKTG WVMHEFRLEG RLPHPLPRSA KDEWAVSKVF NKELTATNGA MATAMAAAPD AGIERVSSFG
201: FISDHFLDAG ELPPLMDPPL GGDVDQVIDF NSNSAYATGG RSGSGLEVKM EQHMPPHMMY SSPYFSLPAA NSGDLSPAIR RYCKAEQVSG QTSALSPSRD
301: TGLSTDPNAA GCAEISSAPT PSSHNQDFLD HLDEYPALNL ADIWKY
101: GYWKATGKDK EIFRGRGILV GMKKTLVFYL GRAPRGEKTG WVMHEFRLEG RLPHPLPRSA KDEWAVSKVF NKELTATNGA MATAMAAAPD AGIERVSSFG
201: FISDHFLDAG ELPPLMDPPL GGDVDQVIDF NSNSAYATGG RSGSGLEVKM EQHMPPHMMY SSPYFSLPAA NSGDLSPAIR RYCKAEQVSG QTSALSPSRD
301: TGLSTDPNAA GCAEISSAPT PSSHNQDFLD HLDEYPALNL ADIWKY
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.