Factsheet for HORVU3Hr1G014090.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G014460.1
HORVU1Hr1G050960.7
HORVU5Hr1G124010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	HORVU0Hr1G014460.1	AT1G32230.1	19548978
AT3G04060.1	HORVU1Hr1G050960.7	AT1G32230.1	19548978
AT3G04060.1	HORVU5Hr1G124010.1	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G092800.1	Wheat	cytosol	81.57	83.1
TraesCS3D01G078500.1	Wheat	nucleus	85.71	82.67
TraesCS3A01G077900.1	Wheat	nucleus	80.65	81.78
CDY29982	Canola	cytosol	47.93	60.47
EES02626	Sorghum	cytosol	37.33	56.64
GSMUA_Achr10P...	Banana	cytosol	49.77	47.37
HORVU2Hr1G017360.1	Barley	nucleus	30.41	43.42
GSMUA_Achr5P07600_001	Banana	cytosol	48.85	43.09
HORVU2Hr1G017380.1	Barley	cytosol, nucleus, plastid	44.7	41.28
GSMUA_Achr9P16920_001	Banana	cytosol	51.15	36.27
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	53.46	36.25
GSMUA_Achr3P18020_001	Banana	nucleus	48.39	35.84
HORVU7Hr1G031260.1	Barley	nucleus	58.06	35.59
Os01t0393100-01	Rice	nucleus	53.0	35.06
GSMUA_Achr7P18330_001	Banana	nucleus	48.85	34.42
AT3G04060.1	Thale cress	nucleus	53.46	34.32
GSMUA_Achr3P09520_001	Banana	cytosol	50.23	34.28
AT5G18270.1	Thale cress	nucleus	52.53	34.03
HORVU4Hr1G012030.1	Barley	cytosol, mitochondrion, nucleus	46.54	33.78
HORVU7Hr1G039700.1	Barley	nucleus	53.46	33.53
CDY53250	Canola	nucleus	51.61	33.33
Bra006449.1-P	Field mustard	nucleus	51.61	33.33
Bra023669.1-P	Field mustard	nucleus	51.61	33.33
CDY51238	Canola	nucleus	51.61	33.23
CDX70804	Canola	nucleus	51.61	33.23
CDY02636	Canola	nucleus	51.61	33.23
HORVU7Hr1G122680.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	56.22	32.97
Bra002148.1-P	Field mustard	nucleus	50.69	32.74
HORVU4Hr1G089450.1	Barley	cytosol, mitochondrion, nucleus, peroxisome	52.07	32.29
GSMUA_Achr6P08600_001	Banana	nucleus	51.61	32.28
Bra040153.1-P	Field mustard	nucleus	50.69	32.07
CDY50879	Canola	cytoskeleton, cytosol, nucleus	50.69	32.07
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	50.69	31.98
CDY42901	Canola	nucleus	50.69	31.98
HORVU4Hr1G051360.3	Barley	nucleus	50.23	31.5
GSMUA_Achr6P32290_001	Banana	nucleus	49.77	31.21
HORVU2Hr1G089210.4	Barley	cytosol, mitochondrion, nucleus	39.63	30.5
KRH08479	Soybean	nucleus	55.76	29.51
HORVU5Hr1G074810.1	Barley	nucleus	49.31	29.48
HORVU3Hr1G014100.1	Barley	cytosol, nucleus	51.15	29.44
KRG94783	Soybean	nucleus	54.84	29.38
KRH06738	Soybean	nucleus	54.84	29.24
VIT_08s0007g07640.t01	Wine grape	nucleus	53.92	29.03
OQU89451	Sorghum	cytosol	49.31	28.76
EES02651	Sorghum	nucleus	53.0	28.75
Zm00001d040189_P002	Maize	mitochondrion, nucleus, peroxisome	51.61	28.64
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	48.85	28.57
KRH70130	Soybean	nucleus	53.46	28.29
HORVU7Hr1G106480.1	Barley	nucleus	39.17	27.69
EES17917	Sorghum	cytosol	49.77	26.87
HORVU2Hr1G103930.1	Barley	mitochondrion	36.41	26.78
HORVU0Hr1G017490.7	Barley	nucleus	38.25	26.69
HORVU2Hr1G017400.3	Barley	nucleus	47.0	26.63
HORVU2Hr1G080460.8	Barley	plastid	47.93	25.43
HORVU2Hr1G017350.1	Barley	nucleus	46.08	25.19
HORVU2Hr1G017370.1	Barley	cytosol, nucleus, plastid	47.93	24.47
HORVU7Hr1G082420.2	Barley	nucleus	43.78	24.23
Zm00001d008403_P001	Maize	plastid	35.94	24.22
HORVU7Hr1G072670.3	Barley	cytosol, plastid	37.33	23.75
HORVU7Hr1G106660.9	Barley	nucleus, plastid	38.71	23.14
HORVU5Hr1G045640.7	Barley	mitochondrion	46.08	21.98
GSMUA_Achr8P21470_001	Banana	nucleus	50.69	21.32

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:F6IAY3	EMBL:FR819764	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G014090	EnsemblPlants:HORVU3Hr1G014090.1	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF23	SUPFAM:SSF101941
UniParc:UPI0002116FAF	SEG:seg	:	:	:	:

Description

NAC transcription factor [Source:UniProtKB/TrEMBL;Acc:F6IAY3]

Coordinates

chrchr3H:+:31954735..31955752

Molecular Weight (calculated)

24443.1 Da

IEP (calculated)

9.414

GRAVY (calculated)

-0.701

Length

217 amino acids

Sequence
(BLAST)

001: MAGHLQVQQQ QQQQLELPPG FRFHPTDEEI ITSYLAPKVL NPAFEATAIG EVDMNKNEPW ELPKKAKMGQ NEWYFYCQKD RKYPTGIRTN RATKVGYWKA
101: TGKDKEIFNP HCTSMLIGMK KTLVFYKGRA PSGEKTNWVM HEYRLEISKQ STSGLPTSIA NAAAINMSSK EYVVCRIFQK NTGSGPSSMV SYEDVGTGPS
201: NNDQSNRGAT DGMLKYL

Best Arabidopsis Sequence Match ( AT5G07680.1 )
(BLAST)

001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.