Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18330_001 | Banana | nucleus | 65.71 | 74.03 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 50.14 | 70.73 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 59.65 | 67.65 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 60.23 | 65.72 |
| CDY29982 | Canola | cytosol | 31.41 | 63.37 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 62.54 | 62.72 |
| GSMUA_Achr10P... | Banana | cytosol | 38.9 | 59.21 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 48.13 | 57.0 |
| EES02626 | Sorghum | cytosol | 23.05 | 55.94 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 26.22 | 54.17 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 33.14 | 53.99 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 31.99 | 51.87 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 32.28 | 51.61 |
| Bra023669.1-P | Field mustard | nucleus | 48.41 | 50.0 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 49.28 | 50.0 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 48.99 | 49.85 |
| CDY02636 | Canola | nucleus | 48.41 | 49.85 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 32.28 | 49.78 |
| CDY53250 | Canola | nucleus | 48.13 | 49.7 |
| AT5G18270.1 | Thale cress | nucleus | 47.84 | 49.55 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 48.7 | 49.42 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 32.85 | 49.35 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 33.14 | 48.94 |
| Bra002148.1-P | Field mustard | nucleus | 47.26 | 48.81 |
| Bra006449.1-P | Field mustard | nucleus | 47.26 | 48.81 |
| CDX70804 | Canola | nucleus | 47.26 | 48.66 |
| CDY51238 | Canola | nucleus | 47.26 | 48.66 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 47.84 | 47.98 |
| AT3G04060.1 | Thale cress | nucleus | 46.69 | 47.93 |
| Bra040153.1-P | Field mustard | nucleus | 47.26 | 47.81 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 47.84 | 47.7 |
| Zm00001d028995_P001 | Maize | cytosol | 48.13 | 47.58 |
| EER92328 | Sorghum | cytosol | 48.41 | 47.19 |
| CDY42901 | Canola | nucleus | 46.69 | 47.09 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 46.4 | 46.94 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 54.47 | 46.9 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 20.46 | 46.71 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 46.11 | 46.51 |
| Os07t0684800-01 | Rice | cytosol | 39.48 | 45.51 |
| KRG94783 | Soybean | nucleus | 52.16 | 44.69 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 34.87 | 43.84 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 34.87 | 43.84 |
| KRH06738 | Soybean | nucleus | 51.3 | 43.73 |
| Os03t0327100-01 | Rice | nucleus | 44.96 | 43.58 |
| EER97754 | Sorghum | nucleus | 41.79 | 43.54 |
| Zm00001d022517_P001 | Maize | nucleus | 39.48 | 43.08 |
| KRH08479 | Soybean | nucleus | 49.86 | 42.2 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 39.48 | 42.15 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 33.14 | 42.12 |
| KRH70130 | Soybean | nucleus | 48.99 | 41.46 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 34.29 | 41.32 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 39.48 | 41.27 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 38.04 | 41.25 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 28.53 | 41.08 |
| GSMUA_Achr10P... | Banana | nucleus | 38.62 | 40.36 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 40.63 | 40.17 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 37.18 | 39.94 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 40.35 | 39.66 |
| Os01t0393100-01 | Rice | nucleus | 37.46 | 39.63 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 37.18 | 39.33 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 39.77 | 39.2 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 39.19 | 39.08 |
| GSMUA_Achr11P... | Banana | nucleus | 31.41 | 39.07 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 39.77 | 38.76 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 39.77 | 38.76 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 39.48 | 38.7 |
| GSMUA_Achr10P... | Banana | nucleus | 36.31 | 38.41 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 39.48 | 38.38 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 38.9 | 38.24 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 36.02 | 38.23 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 38.62 | 38.18 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 34.87 | 38.17 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 35.45 | 38.08 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 37.75 | 37.86 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 38.04 | 37.82 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 40.06 | 37.77 |
| GSMUA_Achr7P11500_001 | Banana | nucleus | 36.89 | 37.65 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 37.75 | 37.54 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 37.75 | 37.54 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 30.26 | 37.5 |
| GSMUA_Achr11P... | Banana | nucleus | 28.24 | 37.4 |
| Zm00001d005028_P001 | Maize | cytosol | 34.58 | 37.27 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 30.26 | 37.1 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 31.7 | 36.79 |
| GSMUA_Achr10P... | Banana | cytosol | 37.46 | 36.62 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 28.82 | 36.5 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 35.73 | 36.47 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 38.04 | 36.46 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 36.31 | 36.31 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 27.95 | 36.19 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 36.31 | 36.0 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 32.85 | 35.96 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 30.84 | 35.91 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 28.24 | 35.9 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 39.48 | 35.86 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 36.89 | 35.85 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 29.39 | 35.79 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 39.48 | 35.77 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 27.95 | 35.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.94 | 35.02 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 27.67 | 34.66 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 36.89 | 34.59 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 29.97 | 34.55 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 27.67 | 34.53 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 37.75 | 34.47 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 31.12 | 34.29 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 37.46 | 34.21 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 38.04 | 34.02 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 38.33 | 34.02 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 38.9 | 34.01 |
| GSMUA_Achr11P... | Banana | nucleus | 27.09 | 33.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.24 | 33.79 |
| Zm00001d008403_P001 | Maize | plastid | 31.12 | 33.54 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 35.45 | 33.15 |
| Zm00001d052390_P001 | Maize | nucleus | 35.45 | 33.15 |
| OQU89451 | Sorghum | cytosol | 35.45 | 33.06 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 35.73 | 32.89 |
| EES17917 | Sorghum | cytosol | 38.04 | 32.84 |
| Os12t0123800-01 | Rice | nucleus | 37.18 | 32.58 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.06 | 32.55 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 39.77 | 32.47 |
| EES02651 | Sorghum | nucleus | 37.18 | 32.25 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 36.89 | 32.24 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 26.8 | 31.96 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 36.31 | 31.27 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 35.73 | 30.92 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 35.73 | 30.85 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 45.82 | 30.81 |
| Os11t0127000-01 | Rice | nucleus | 24.78 | 29.15 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 35.73 | 27.25 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G08600_001 |
| EnsemblPlants:GSMUA_Achr6P08600_001 | EnsemblPlants:GSMUA_Achr6T08600_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0T5A9 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF7 | SUPFAM:SSF101941 |
| UniParc:UPI000294E3E7 | : | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G08600_001]
Coordinates
chr6:-:5717189..5718483
Molecular Weight (calculated)
39473.7 Da
IEP (calculated)
7.021
GRAVY (calculated)
-0.638
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDVSVLNMD DDCMDLPPGF RFHPTDEEII THYLSQKVID RGFSARAMGE VDLNKCEPWD LPSKARMGEK EWYFFCQRDR KYPTGMRTNR ATEAGYWKAT
101: GKDKEIYRGR RVLVGMKKTL VFYRGRAPRG HKTNWVMHEF RLEGKFPFPG VPKSAKDEWV VCRVFHKNMG ITRSPPPPGS ERIDSLGKDL FDSTALPPLM
201: DPPYLSSDAR PSSCFIDKEE GFDFKDIPSF SAMMGMEDQV SSNPPQSSIF YSQVLAQSPY CSFPGHLHQQ QAMTRALAAD HDASSAIRRH CKMEQCWNNS
301: MGCPSQDTGL STDRNTEISS SMVSNHFGDF DNPSCGPLIN LDNIWKY
101: GKDKEIYRGR RVLVGMKKTL VFYRGRAPRG HKTNWVMHEF RLEGKFPFPG VPKSAKDEWV VCRVFHKNMG ITRSPPPPGS ERIDSLGKDL FDSTALPPLM
201: DPPYLSSDAR PSSCFIDKEE GFDFKDIPSF SAMMGMEDQV SSNPPQSSIF YSQVLAQSPY CSFPGHLHQQ QAMTRALAAD HDASSAIRRH CKMEQCWNNS
301: MGCPSQDTGL STDRNTEISS SMVSNHFGDF DNPSCGPLIN LDNIWKY
001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY
Arabidopsis Description
NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.