Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | CDY22597 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY41739 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY43007 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY60257 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY67026 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 99.71 | 99.42 |
| CDY29982 | Canola | cytosol | 44.31 | 88.37 |
| CDY42901 | Canola | nucleus | 88.34 | 88.08 |
| AT3G04060.1 | Thale cress | nucleus | 81.34 | 82.54 |
| CDY53250 | Canola | nucleus | 65.6 | 66.96 |
| CDY02636 | Canola | nucleus | 65.6 | 66.77 |
| CDY51238 | Canola | nucleus | 65.01 | 66.17 |
| CDX70804 | Canola | nucleus | 64.72 | 65.88 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 42.86 | 59.76 |
| GSMUA_Achr10P... | Banana | cytosol | 36.73 | 55.26 |
| EES02626 | Sorghum | cytosol | 22.74 | 54.55 |
| CDY68680 | Canola | nucleus | 32.65 | 53.33 |
| CDY51707 | Canola | cytosol | 24.2 | 52.53 |
| CDY70041 | Canola | nucleus | 32.65 | 52.34 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 31.78 | 51.17 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 32.07 | 50.69 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 31.49 | 50.47 |
| CDX92881 | Canola | cytosol | 23.91 | 50.31 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 44.02 | 49.35 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 45.48 | 49.06 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 31.2 | 47.56 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 42.57 | 47.4 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 20.99 | 47.37 |
| CDY69936 | Canola | nucleus | 38.78 | 47.0 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 32.07 | 46.81 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 46.94 | 46.4 |
| CDY64672 | Canola | nucleus | 38.19 | 46.29 |
| CDY14030 | Canola | nucleus | 42.27 | 46.03 |
| CDX67433 | Canola | nucleus | 38.19 | 45.49 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 34.11 | 45.17 |
| CDY40775 | Canola | nucleus | 42.57 | 45.06 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 52.77 | 44.91 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 38.19 | 44.71 |
| CDX74442 | Canola | nucleus | 37.61 | 44.64 |
| CDY30258 | Canola | nucleus | 37.61 | 44.64 |
| CDY37008 | Canola | nucleus | 37.32 | 44.44 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 44.61 | 44.22 |
| CDY56940 | Canola | nucleus | 41.98 | 44.04 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 43.44 | 43.7 |
| CDY42875 | Canola | nucleus | 41.11 | 43.38 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 43.15 | 43.27 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 43.73 | 43.1 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 42.86 | 42.98 |
| KRG94783 | Soybean | nucleus | 50.15 | 42.47 |
| EER92328 | Sorghum | cytosol | 44.02 | 42.42 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 34.11 | 42.39 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 42.57 | 42.2 |
| Os07t0684800-01 | Rice | cytosol | 37.03 | 42.19 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 33.53 | 41.67 |
| KRH06738 | Soybean | nucleus | 49.27 | 41.52 |
| KRH08479 | Soybean | nucleus | 49.56 | 41.46 |
| Zm00001d028995_P001 | Maize | cytosol | 42.27 | 41.31 |
| KRH70130 | Soybean | nucleus | 49.27 | 41.22 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 36.44 | 40.45 |
| Os03t0327100-01 | Rice | nucleus | 41.69 | 39.94 |
| EER97754 | Sorghum | nucleus | 38.78 | 39.94 |
| Zm00001d022517_P001 | Maize | nucleus | 37.03 | 39.94 |
| CDX75813 | Canola | nucleus | 35.86 | 39.94 |
| CDX75966 | Canola | nucleus | 32.65 | 39.86 |
| CDX82444 | Canola | nucleus | 35.86 | 39.81 |
| CDY20103 | Canola | nucleus | 34.99 | 39.6 |
| CDY51910 | Canola | nucleus | 28.57 | 39.2 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 31.2 | 39.19 |
| CDY20314 | Canola | nucleus | 36.15 | 39.12 |
| CDY32316 | Canola | nucleus | 34.99 | 39.09 |
| CDY18519 | Canola | nucleus | 34.4 | 39.07 |
| CDX85242 | Canola | cytosol | 36.44 | 38.94 |
| CDX76817 | Canola | nucleus | 35.86 | 38.8 |
| CDY34773 | Canola | nucleus | 35.86 | 38.8 |
| CDY69369 | Canola | nucleus | 34.11 | 38.49 |
| CDY67593 | Canola | nucleus | 34.4 | 38.44 |
| CDY51941 | Canola | nucleus | 33.24 | 38.13 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 35.57 | 38.12 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 35.86 | 37.5 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 38.19 | 37.32 |
| Os01t0393100-01 | Rice | nucleus | 35.28 | 36.89 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 37.9 | 36.83 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 37.61 | 36.65 |
| Zm00001d005028_P001 | Maize | cytosol | 34.4 | 36.65 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 28.57 | 36.57 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 37.32 | 36.47 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 36.73 | 36.21 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 37.03 | 35.98 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 33.82 | 35.91 |
| CDY60115 | Canola | nucleus | 29.15 | 35.84 |
| CDX82566 | Canola | nucleus | 28.86 | 35.74 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 33.53 | 35.6 |
| CDX96262 | Canola | nucleus | 37.32 | 34.88 |
| CDY28805 | Canola | nucleus | 37.32 | 34.88 |
| CDX98529 | Canola | mitochondrion | 27.7 | 34.8 |
| CDX99695 | Canola | mitochondrion | 27.7 | 34.8 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 37.32 | 34.78 |
| CDY23558 | Canola | nucleus | 27.7 | 34.67 |
| CDY45986 | Canola | cytosol | 31.78 | 34.06 |
| CDY20411 | Canola | cytosol | 31.78 | 33.96 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 36.44 | 33.6 |
| CDY42401 | Canola | nucleus | 31.2 | 33.33 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 32.94 | 33.24 |
| CDX87602 | Canola | cytosol | 32.36 | 33.13 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 36.73 | 32.98 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 33.53 | 32.95 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 33.53 | 32.95 |
| CDX88273 | Canola | cytosol | 32.36 | 32.94 |
| CDY10515 | Canola | nucleus | 30.9 | 32.92 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 34.11 | 32.87 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 34.11 | 32.77 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 33.24 | 32.66 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 32.94 | 32.66 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 33.82 | 32.58 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 33.82 | 32.49 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 33.53 | 32.49 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 36.15 | 32.38 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 34.11 | 32.32 |
| Os12t0123800-01 | Rice | nucleus | 37.03 | 32.07 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 37.03 | 31.99 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 32.36 | 31.99 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 35.86 | 31.7 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.78 | 31.14 |
| Zm00001d052390_P001 | Maize | nucleus | 33.53 | 31.0 |
| OQU89451 | Sorghum | cytosol | 33.24 | 30.65 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.94 | 30.54 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 37.61 | 30.35 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 33.24 | 30.24 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 34.4 | 30.18 |
| EES02651 | Sorghum | nucleus | 34.99 | 30.0 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 34.69 | 29.97 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.03 | 29.74 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 32.65 | 29.47 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 32.65 | 29.47 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 31.78 | 29.38 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 34.4 | 29.28 |
| Zm00001d008403_P001 | Maize | plastid | 27.41 | 29.19 |
| EES17917 | Sorghum | cytosol | 34.11 | 29.1 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 33.82 | 28.93 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 33.82 | 28.86 |
| Os11t0127000-01 | Rice | nucleus | 23.91 | 27.8 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 41.69 | 27.71 |
| CDX97445 | Canola | cytosol | 26.82 | 27.38 |
| CDY14236 | Canola | cytosol | 26.82 | 27.38 |
| CDY35197 | Canola | nucleus | 26.53 | 27.25 |
| CDY38380 | Canola | nucleus | 26.53 | 26.45 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 34.4 | 25.93 |
| CDX92880 | Canola | nucleus | 3.79 | 6.57 |
| CDY51708 | Canola | nucleus | 3.79 | 6.53 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IN86 | UniProt:A0A078IN86 | EnsemblPlants:CDY50879 | ProteinID:CDY50879 |
| ProteinID:CDY50879.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00097708001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF46 | SUPFAM:SSF101941 | UniParc:UPI0004EDAE6D | SEG:seg | : | : |
Description
BnaA05g37400DBnaA05g37400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN86]
Coordinates
chrLK032945:-:73072..74666
Molecular Weight (calculated)
38305.2 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.523
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEVGAVVN QGGDHEVVDL PPGFRFHPTD EEIITHYLKE KVFNVQFTSA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATLSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYRGR APKGEKTNWV MHEFRLDGIY SYHNLPKSSR DEWVVCRVFH KNAPPPTTIT TTTNQLIRIE SLDNIDHLLD
201: FSSLPPLIDP GFMGQPGPSL SGSGQQNNLK PILHHPPTAA IDNTYFPAQT VNHTYHSVPS SGSGLVYGTG SGNNNNGMIK LEHSLVSVSQ ETGLSSDMNT
301: TATPEICSYT RMVNSAANEA MMDGNKTSYD DDLGIFWDDY KLI
101: WKATGKDKEI FRGKGCLVGM KKTLVFYRGR APKGEKTNWV MHEFRLDGIY SYHNLPKSSR DEWVVCRVFH KNAPPPTTIT TTTNQLIRIE SLDNIDHLLD
201: FSSLPPLIDP GFMGQPGPSL SGSGQQNNLK PILHHPPTAA IDNTYFPAQT VNHTYHSVPS SGSGLVYGTG SGNNNNGMIK LEHSLVSVSQ ETGLSSDMNT
301: TATPEICSYT RMVNSAANEA MMDGNKTSYD DDLGIFWDDY KLI
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.