Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68680 | Canola | nucleus | 69.04 | 92.38 |
| CDY70041 | Canola | nucleus | 69.75 | 91.59 |
| Bra001705.1-P | Field mustard | nucleus | 96.44 | 90.64 |
| CDY51941 | Canola | nucleus | 96.09 | 90.3 |
| CDY18519 | Canola | nucleus | 88.26 | 82.12 |
| CDY69369 | Canola | nucleus | 87.19 | 80.59 |
| CDY67593 | Canola | nucleus | 87.54 | 80.13 |
| AT3G18400.1 | Thale cress | nucleus | 88.97 | 79.62 |
| CDY29982 | Canola | cytosol | 34.52 | 56.4 |
| KRH60340 | Soybean | nucleus | 62.28 | 54.52 |
| KRH41635 | Soybean | nucleus | 60.5 | 54.31 |
| VIT_17s0000g03660.t01 | Wine grape | nucleus | 62.99 | 54.13 |
| KRH48487 | Soybean | nucleus | 61.92 | 53.7 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 31.32 | 52.38 |
| KRH39185 | Soybean | nucleus | 61.21 | 51.96 |
| CDY51707 | Canola | cytosol | 28.47 | 50.63 |
| Solyc12g036480.1.1 | Tomato | nucleus | 58.72 | 50.61 |
| PGSC0003DMT400013753 | Potato | nucleus | 60.14 | 50.45 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 51.25 | 50.0 |
| CDX92881 | Canola | cytosol | 28.11 | 48.47 |
| HORVU4Hr1G012030.1 | Barley | cytosol, mitochondrion, nucleus | 49.82 | 46.82 |
| TraesCS4D01G071200.1 | Wheat | cytosol, mitochondrion, nucleus | 49.82 | 46.82 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 49.47 | 46.49 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 48.75 | 45.82 |
| PGSC0003DMT400074048 | Potato | nucleus | 49.11 | 45.25 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 41.28 | 44.79 |
| GSMUA_Achr10P... | Banana | nucleus | 50.89 | 43.6 |
| CDY69936 | Canola | nucleus | 43.77 | 43.46 |
| CDY64672 | Canola | nucleus | 43.06 | 42.76 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 48.4 | 42.11 |
| Zm00001d033308_P001 | Maize | nucleus | 48.75 | 42.02 |
| CDX67433 | Canola | nucleus | 43.06 | 42.01 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 50.18 | 41.35 |
| CDY37008 | Canola | nucleus | 41.99 | 40.97 |
| Zm00001d013717_P001 | Maize | nucleus | 48.04 | 40.91 |
| CDY20314 | Canola | nucleus | 45.2 | 40.06 |
| CDY30258 | Canola | nucleus | 40.93 | 39.79 |
| CDX74442 | Canola | nucleus | 40.93 | 39.79 |
| CDY20103 | Canola | nucleus | 42.7 | 39.6 |
| CDY14030 | Canola | nucleus | 44.13 | 39.37 |
| CDX75813 | Canola | nucleus | 43.06 | 39.29 |
| CDX82444 | Canola | nucleus | 43.06 | 39.16 |
| CDY32316 | Canola | nucleus | 42.7 | 39.09 |
| CDY34773 | Canola | nucleus | 43.77 | 38.8 |
| CDY42875 | Canola | nucleus | 44.84 | 38.77 |
| CDX76817 | Canola | nucleus | 43.42 | 38.49 |
| CDY56940 | Canola | nucleus | 44.48 | 38.23 |
| CDY40775 | Canola | nucleus | 43.77 | 37.96 |
| CDY51910 | Canola | nucleus | 32.38 | 36.4 |
| CDY45986 | Canola | cytosol | 40.93 | 35.94 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 39.5 | 35.92 |
| CDX85242 | Canola | cytosol | 40.93 | 35.83 |
| CDY20411 | Canola | cytosol | 40.93 | 35.83 |
| CDY53250 | Canola | nucleus | 42.7 | 35.71 |
| CDY02636 | Canola | nucleus | 42.7 | 35.61 |
| CDY28805 | Canola | nucleus | 46.26 | 35.42 |
| CDX96262 | Canola | nucleus | 46.26 | 35.42 |
| CDY51238 | Canola | nucleus | 41.28 | 34.42 |
| CDX70804 | Canola | nucleus | 41.28 | 34.42 |
| CDX87602 | Canola | cytosol | 40.93 | 34.33 |
| CDX99695 | Canola | mitochondrion | 33.1 | 34.07 |
| CDX98529 | Canola | mitochondrion | 33.1 | 34.07 |
| CDX88273 | Canola | cytosol | 40.57 | 33.83 |
| CDY60115 | Canola | nucleus | 33.1 | 33.33 |
| CDX82566 | Canola | nucleus | 32.74 | 33.21 |
| CDY23558 | Canola | nucleus | 32.38 | 33.21 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.86 | 32.65 |
| CDY42901 | Canola | nucleus | 39.5 | 32.27 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 40.93 | 30.91 |
| CDY42401 | Canola | nucleus | 33.45 | 29.28 |
| CDY10515 | Canola | nucleus | 33.45 | 29.19 |
| CDY35197 | Canola | nucleus | 34.16 | 28.74 |
| CDY38380 | Canola | nucleus | 34.52 | 28.2 |
| CDX97445 | Canola | cytosol | 33.1 | 27.68 |
| CDY14236 | Canola | cytosol | 33.1 | 27.68 |
| Solyc06g069100.1.1 | Tomato | nucleus | 47.69 | 26.96 |
| CDX92880 | Canola | nucleus | 6.41 | 9.09 |
| CDY51708 | Canola | nucleus | 6.41 | 9.05 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CFM0 | EnsemblPlants:CDX75966 | ProteinID:CDX75966 | ProteinID:CDX75966.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00123999001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF3 | SUPFAM:SSF101941 | UniParc:UPI0004EF48B1 | : | : | : |
Description
BnaC03g40490D
Coordinates
chrLK031805:-:2213320..2214948
Molecular Weight (calculated)
32172.7 Da
IEP (calculated)
7.953
GRAVY (calculated)
-0.774
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDT GFTGKAVVDV DFNKCEPWDL PAKASMGEKE WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYQSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFKPAK EEWVVCRVFE KSTSAKKPQE QQPQSSFGSP CDASSSMANE FEDIELQNLN SNSSTIDYNH
201: IHQYSQNGVY SQNNTTTSTA RLNMNMATNN IPSWSTTNLL GQPLSPINSL LLRAFQIRNS YININPSPLQ QGEAFNMDSM W
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFKPAK EEWVVCRVFE KSTSAKKPQE QQPQSSFGSP CDASSSMANE FEDIELQNLN SNSSTIDYNH
201: IHQYSQNGVY SQNNTTTSTA RLNMNMATNN IPSWSTTNLL GQPLSPINSL LLRAFQIRNS YININPSPLQ QGEAFNMDSM W
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.