Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92880 | Canola | nucleus | 92.96 | 93.43 |
| Bra024194.1-P | Field mustard | nucleus | 97.99 | 55.56 |
| CDY35197 | Canola | nucleus | 77.39 | 46.11 |
| CDY38380 | Canola | nucleus | 78.39 | 45.35 |
| CDY14236 | Canola | cytosol | 73.37 | 43.45 |
| AT4G28530.1 | Thale cress | nucleus | 75.88 | 42.9 |
| CDX97445 | Canola | cytosol | 72.36 | 42.86 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 21.11 | 14.19 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 17.09 | 13.88 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 20.1 | 13.61 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 20.1 | 13.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.09 | 12.41 |
| Solyc09g025310.2.1 | Tomato | nucleus | 16.58 | 12.22 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 16.58 | 11.91 |
| PGSC0003DMT400051915 | Potato | cytosol | 16.08 | 11.27 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 15.58 | 11.15 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 16.08 | 11.0 |
| Os10t0477600-01 | Rice | nucleus | 17.09 | 10.49 |
| Os04t0515900-01 | Rice | nucleus | 14.57 | 10.43 |
| Os03t0109000-01 | Rice | nucleus | 14.57 | 9.76 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 13.57 | 9.75 |
| EES05451 | Sorghum | nucleus | 14.57 | 9.6 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 14.07 | 9.56 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 13.07 | 9.52 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 14.57 | 9.48 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 14.57 | 9.32 |
| KXG26719 | Sorghum | nucleus | 13.57 | 9.31 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 14.57 | 9.29 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 13.57 | 9.09 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 13.57 | 9.09 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 13.57 | 9.06 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 14.07 | 8.89 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 12.06 | 8.79 |
| GSMUA_Achr11P... | Banana | nucleus | 11.56 | 8.78 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 13.57 | 8.74 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 13.57 | 8.71 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 13.57 | 8.68 |
| EES07725 | Sorghum | cytosol | 13.07 | 8.58 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 12.06 | 8.51 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 12.56 | 8.5 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 12.56 | 8.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.55 | 8.17 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.56 | 8.14 |
| CDY10515 | Canola | nucleus | 13.07 | 8.07 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 12.06 | 7.92 |
| CDY42401 | Canola | nucleus | 12.56 | 7.79 |
| Os02t0810900-01 | Rice | nucleus | 12.56 | 7.55 |
| CDY23558 | Canola | nucleus | 10.05 | 7.3 |
| CDX82566 | Canola | nucleus | 10.05 | 7.22 |
| CDY51910 | Canola | nucleus | 9.05 | 7.2 |
| GSMUA_Achr11P... | Banana | nucleus | 10.05 | 7.19 |
| CDY60115 | Canola | nucleus | 10.05 | 7.17 |
| CDY67593 | Canola | nucleus | 11.06 | 7.17 |
| CDY68680 | Canola | nucleus | 7.54 | 7.14 |
| CDY70041 | Canola | nucleus | 7.54 | 7.01 |
| CDY18519 | Canola | nucleus | 10.55 | 6.95 |
| CDY69369 | Canola | nucleus | 10.55 | 6.91 |
| CDY51941 | Canola | nucleus | 10.05 | 6.69 |
| CDX75966 | Canola | nucleus | 9.05 | 6.41 |
| CDY69936 | Canola | nucleus | 9.05 | 6.36 |
| CDY56940 | Canola | nucleus | 10.05 | 6.12 |
| CDY42875 | Canola | nucleus | 9.55 | 5.85 |
| CDY64672 | Canola | nucleus | 8.04 | 5.65 |
| CDY14030 | Canola | nucleus | 8.54 | 5.4 |
| CDX88273 | Canola | cytosol | 9.05 | 5.34 |
| CDY45986 | Canola | cytosol | 8.54 | 5.31 |
| CDY20411 | Canola | cytosol | 8.54 | 5.3 |
| CDY40775 | Canola | nucleus | 8.54 | 5.25 |
| CDX74442 | Canola | nucleus | 7.54 | 5.19 |
| CDX99695 | Canola | mitochondrion | 7.04 | 5.13 |
| CDX98529 | Canola | mitochondrion | 7.04 | 5.13 |
| CDX87602 | Canola | cytosol | 8.54 | 5.07 |
| CDY20314 | Canola | nucleus | 8.04 | 5.05 |
| CDY51238 | Canola | nucleus | 8.54 | 5.04 |
| CDX70804 | Canola | nucleus | 8.54 | 5.04 |
| CDY28805 | Canola | nucleus | 9.05 | 4.9 |
| CDX96262 | Canola | nucleus | 9.05 | 4.9 |
| CDY32316 | Canola | nucleus | 7.54 | 4.89 |
| CDY30258 | Canola | nucleus | 7.04 | 4.84 |
| CDY53250 | Canola | nucleus | 8.04 | 4.76 |
| CDY02636 | Canola | nucleus | 8.04 | 4.75 |
| CDY34773 | Canola | nucleus | 7.54 | 4.73 |
| CDX85242 | Canola | cytosol | 7.54 | 4.67 |
| CDY20103 | Canola | nucleus | 7.04 | 4.62 |
| CDX75813 | Canola | nucleus | 7.04 | 4.55 |
| CDX82444 | Canola | nucleus | 7.04 | 4.53 |
| CDX76817 | Canola | nucleus | 7.04 | 4.42 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 6.53 | 4.21 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 4.02 | 4.19 |
| CDX67433 | Canola | nucleus | 6.03 | 4.17 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 5.03 | 3.86 |
| CDY37008 | Canola | nucleus | 5.53 | 3.82 |
| CDY51707 | Canola | cytosol | 3.02 | 3.8 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 6.53 | 3.79 |
| CDY42901 | Canola | nucleus | 6.53 | 3.78 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 6.03 | 3.23 |
| CDX92881 | Canola | cytosol | 2.51 | 3.07 |
| CDY29982 | Canola | cytosol | 2.01 | 2.33 |
Protein Annotations
| EnsemblPlants:CDY51708 | EnsemblPlantsGene:GSBRNA2T00004057001 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF4 | ProteinID:CDY51708 | ProteinID:CDY51708.1 |
| SEG:seg | UniParc:UPI0004EE3671 | UniProt:A0A078IRI5 | MapMan:35.2 | : | : |
Description
BnaA03g58980DBnaA03g58980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRI5]
Coordinates
chrLK033020:+:65069..65763
Molecular Weight (calculated)
22686.2 Da
IEP (calculated)
5.393
GRAVY (calculated)
-0.778
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MHETARNEDW VLCRVFNKGR DLSLQDSNYK NDDHKTQRFE VNDAPDLNYA PNYNNQLQPL LSSPRSTTID PPHHHDQWEQ LMKQPSRIID NTYHHHCQHQ
101: SIACGWEQMM IGSMSSSSSH GPDHESLLNL LYADKNNSVN IAADHHDKNY EKILLSSDIA SLDHDKTCMG SSLDVGMVSD LPMECAGLSF ETENLLAFH
101: SIACGWEQMM IGSMSSSSSH GPDHESLLNL LYADKNNSVN IAADHHDKNY EKILLSSDIA SLDHDKTCMG SSLDVGMVSD LPMECAGLSF ETENLLAFH
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLEDWVLC RVFNKGRDSS LQDNNYYNND NQTQRLEVND APDLNYNNQL PPLLSSPPHN HQHEKMKIQV CDQWEQLMKQ
201: PSRTTGHPYH HHCHHQTIAC GWEQMMIGSL SSPSSHGPDH ESLLNLLYVD NNNSVNISGD HHQNYEKILL SSLDMTSLDH DKTCMGSSSD GGMVSDLHME
301: CGGLSFETEN ILAFQ
101: ATVSGYWKAT GKDRTVMDPR TRQLEDWVLC RVFNKGRDSS LQDNNYYNND NQTQRLEVND APDLNYNNQL PPLLSSPPHN HQHEKMKIQV CDQWEQLMKQ
201: PSRTTGHPYH HHCHHQTIAC GWEQMMIGSL SSPSSHGPDH ESLLNLLYVD NNNSVNISGD HHQNYEKILL SSLDMTSLDH DKTCMGSSSD GGMVSDLHME
301: CGGLSFETEN ILAFQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.