Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45986 | Canola | cytosol | 96.57 | 96.88 |
| CDX87602 | Canola | cytosol | 90.03 | 86.27 |
| CDX88273 | Canola | cytosol | 90.03 | 85.76 |
| AT1G76420.1 | Thale cress | cytosol | 85.67 | 82.34 |
| CDY68680 | Canola | nucleus | 35.83 | 54.76 |
| CDY29982 | Canola | cytosol | 29.28 | 54.65 |
| CDY70041 | Canola | nucleus | 35.83 | 53.74 |
| CDY51707 | Canola | cytosol | 24.61 | 50.0 |
| CDX92881 | Canola | cytosol | 24.61 | 48.47 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 36.14 | 44.79 |
| CDY69936 | Canola | nucleus | 38.01 | 43.11 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 42.37 | 42.9 |
| KRH60880 | Soybean | nucleus | 46.73 | 42.86 |
| CDY64672 | Canola | nucleus | 37.07 | 42.05 |
| CDX74442 | Canola | nucleus | 37.38 | 41.52 |
| CDY30258 | Canola | nucleus | 37.38 | 41.52 |
| CDY37008 | Canola | nucleus | 36.76 | 40.97 |
| CDX67433 | Canola | nucleus | 36.76 | 40.97 |
| CDX75966 | Canola | nucleus | 35.83 | 40.93 |
| KRH51562 | Soybean | nucleus | 46.42 | 39.84 |
| CDY14030 | Canola | nucleus | 38.94 | 39.68 |
| CDY51941 | Canola | nucleus | 36.76 | 39.46 |
| CDY18519 | Canola | nucleus | 36.14 | 38.41 |
| CDY40775 | Canola | nucleus | 38.63 | 38.27 |
| CDY67593 | Canola | nucleus | 36.45 | 38.11 |
| CDY51910 | Canola | nucleus | 29.59 | 38.0 |
| EES14261 | Sorghum | nucleus | 40.19 | 37.83 |
| CDY69369 | Canola | nucleus | 35.83 | 37.83 |
| PGSC0003DMT400025690 | Potato | nucleus | 41.43 | 37.46 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 38.94 | 37.43 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 38.94 | 37.31 |
| CDY56940 | Canola | nucleus | 38.01 | 37.31 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 38.94 | 37.09 |
| CDY42875 | Canola | nucleus | 37.38 | 36.92 |
| Os08t0511200-00 | Rice | cytosol | 39.56 | 36.6 |
| CDX85242 | Canola | cytosol | 36.45 | 36.45 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 34.58 | 35.92 |
| CDX75813 | Canola | nucleus | 34.27 | 35.71 |
| CDY20103 | Canola | nucleus | 33.64 | 35.64 |
| CDX82444 | Canola | nucleus | 34.27 | 35.6 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 47.04 | 35.53 |
| CDY20314 | Canola | nucleus | 34.89 | 35.33 |
| CDY32316 | Canola | nucleus | 33.64 | 35.18 |
| CDX96262 | Canola | nucleus | 40.19 | 35.15 |
| CDX76817 | Canola | nucleus | 34.58 | 35.02 |
| CDY34773 | Canola | nucleus | 34.58 | 35.02 |
| CDY28805 | Canola | nucleus | 39.88 | 34.88 |
| CDX82566 | Canola | nucleus | 29.91 | 34.66 |
| CDY60115 | Canola | nucleus | 29.91 | 34.41 |
| CDY23558 | Canola | nucleus | 28.97 | 33.94 |
| CDY53250 | Canola | nucleus | 35.2 | 33.63 |
| CDY02636 | Canola | nucleus | 34.89 | 33.23 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 37.69 | 32.53 |
| CDY42401 | Canola | nucleus | 32.09 | 32.09 |
| CDY51238 | Canola | nucleus | 33.64 | 32.05 |
| CDX70804 | Canola | nucleus | 33.64 | 32.05 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 33.96 | 31.78 |
| CDY10515 | Canola | nucleus | 31.78 | 31.68 |
| CDY42901 | Canola | nucleus | 33.64 | 31.4 |
| CDX98529 | Canola | mitochondrion | 25.86 | 30.4 |
| CDX99695 | Canola | mitochondrion | 25.86 | 30.4 |
| Zm00001d031463_P002 | Maize | mitochondrion | 39.56 | 30.09 |
| CDY35197 | Canola | nucleus | 28.35 | 27.25 |
| CDX97445 | Canola | cytosol | 28.04 | 26.79 |
| CDY14236 | Canola | cytosol | 28.04 | 26.79 |
| CDY38380 | Canola | nucleus | 28.35 | 26.45 |
| CDX92880 | Canola | nucleus | 5.61 | 9.09 |
| CDY51708 | Canola | nucleus | 5.3 | 8.54 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078G4Q7 | UniProt:A0A078G4Q7 | EnsemblPlants:CDY20411 | ProteinID:CDY20411 |
| ProteinID:CDY20411.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00012468001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF49 | SUPFAM:SSF101941 | UniParc:UPI0004EEC603 | SEG:seg | : | : |
Description
BnaC02g24050DBnaC02g24050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4Q7]
Coordinates
chrLK032107:+:540076..542171
Molecular Weight (calculated)
36581.1 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.589
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLALEDVLS ELAGEVNDRG LPPGFRFHPT DEELITFYLA SKVFHGGLCG IHIAEVDLNR CEPWELPEMA KMGEREWYFY SLRDRKYPTG LRTNRATTAG
101: YWKATGKDKE IFSGGGGGAL VGMKKTLVFY KGRAPRGLKS KWVMHEYRLE TDLSHRHTCK EEWVICRVFN KTGDRKNVGI HNQISYLHNT SLSTTQHHHL
201: ENLPSLLQPS KTLTNFPPLL YYDDTHQNYN DNLLHGISGH NVDELKALIN PVVSQLNEVL FSPESNYYND EDDNFGVKTE QYSNGGNNDL DVRDYLENPL
301: FQEAGYSLLG LSSSPGPRML Y
101: YWKATGKDKE IFSGGGGGAL VGMKKTLVFY KGRAPRGLKS KWVMHEYRLE TDLSHRHTCK EEWVICRVFN KTGDRKNVGI HNQISYLHNT SLSTTQHHHL
201: ENLPSLLQPS KTLTNFPPLL YYDDTHQNYN DNLLHGISGH NVDELKALIN PVVSQLNEVL FSPESNYYND EDDNFGVKTE QYSNGGNNDL DVRDYLENPL
301: FQEAGYSLLG LSSSPGPRML Y
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.