Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G246100.1 | Wheat | cytosol | 98.22 | 98.81 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 97.63 | 98.5 |
| Os08t0511200-00 | Rice | cytosol | 74.78 | 72.62 |
| EES14261 | Sorghum | nucleus | 69.14 | 68.33 |
| Zm00001d031463_P002 | Maize | mitochondrion | 70.33 | 56.16 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 45.7 | 48.58 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 29.38 | 46.26 |
| PGSC0003DMT400025690 | Potato | nucleus | 44.81 | 42.54 |
| Bra008259.1-P | Field mustard | cytosol | 37.39 | 39.38 |
| CDY45986 | Canola | cytosol | 37.09 | 39.06 |
| CDY20411 | Canola | cytosol | 37.09 | 38.94 |
| Bra015750.1-P | Field mustard | cytosol | 38.28 | 38.51 |
| CDX87602 | Canola | cytosol | 38.28 | 38.51 |
| CDX88273 | Canola | cytosol | 38.28 | 38.28 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 31.16 | 38.04 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 33.53 | 37.79 |
| AT1G76420.1 | Thale cress | cytosol | 37.09 | 37.43 |
| KRH60880 | Soybean | nucleus | 38.28 | 36.86 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 46.29 | 36.71 |
| KRH51562 | Soybean | nucleus | 40.06 | 36.1 |
| TraesCS7A01G305200.1 | Wheat | cytosol | 29.67 | 34.6 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 35.31 | 33.43 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 34.72 | 31.88 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 32.94 | 31.81 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 32.05 | 31.58 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 28.78 | 31.29 |
| TraesCS5A01G049100.2 | Wheat | cytosol, nucleus, peroxisome | 28.19 | 31.05 |
| TraesCS7A01G464100.1 | Wheat | nucleus | 28.19 | 30.94 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 33.23 | 30.85 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.94 | 30.66 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 29.67 | 30.49 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 31.45 | 30.37 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 34.12 | 30.26 |
| TraesCS7A01G464800.1 | Wheat | nucleus | 27.6 | 30.19 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 31.16 | 29.75 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 27.0 | 29.74 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 29.67 | 28.74 |
| TraesCS2A01G338300.1 | Wheat | nucleus | 30.27 | 28.73 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 26.41 | 28.62 |
| TraesCS2A01G462500.1 | Wheat | plastid | 27.6 | 27.76 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 31.16 | 27.49 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 31.45 | 26.3 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF44 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7A01G247600 | EnsemblPlants:TraesCS7A01G247600.1 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:228261466..228263284
Molecular Weight (calculated)
37354.2 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.530
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQQQHPHQP AAAMGDALWE LIGEEMAAAE AAAGEHGLPP GFRFHPTDEE LVTFYLAAKV FNGACCGGVD IAEVDLNRCE PWDLPEAARM GEREWYFFSL
101: RDRKYPTGLR TNRATGAGYW KATGKDREVL NAATGSLLGM KKTLVFYRGR APRGEKTKWV LHEYRLDGDF GAARRSCKEE WVVCRIFHKA VDPYSKMMEM
201: RNPYCYFPMS PHHPSFFQDA PPVPFPNPSQ LIPFHHDLPN LQSSPIMQSQ GQAKNTSSNN GGFPAAACVQ EQPNSSCNQA YFPFPPFASI VNGKAGPPAQ
301: PRVNGGPQEP PPTWLDACLQ HSAFMYEMGP PAATRGA
101: RDRKYPTGLR TNRATGAGYW KATGKDREVL NAATGSLLGM KKTLVFYRGR APRGEKTKWV LHEYRLDGDF GAARRSCKEE WVVCRIFHKA VDPYSKMMEM
201: RNPYCYFPMS PHHPSFFQDA PPVPFPNPSQ LIPFHHDLPN LQSSPIMQSQ GQAKNTSSNN GGFPAAACVQ EQPNSSCNQA YFPFPPFASI VNGKAGPPAQ
301: PRVNGGPQEP PPTWLDACLQ HSAFMYEMGP PAATRGA
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.