Factsheet for TraesCS2A01G338300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G343600.1	Wheat	nucleus	97.18	97.46
TraesCS2D01G324700.1	Wheat	nucleus	96.9	97.45
HORVU2Hr1G080460.8	Barley	plastid	91.83	79.71
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	73.52	76.09
EES10946	Sorghum	cytosol, mitochondrion, nucleus	65.63	65.45
Zm00001d003414_P002	Maize	cytosol, mitochondrion, nucleus	64.79	63.01
TraesCS3A01G077900.1	Wheat	nucleus	27.32	45.33
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	34.65	41.14
TraesCS2A01G101200.1	Wheat	nucleus	30.42	39.13
TraesCS4A01G130600.1	Wheat	nucleus	37.18	38.6
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	32.11	37.25
TraesCS7A01G464100.1	Wheat	nucleus	31.27	36.16
TraesCS7A01G305200.1	Wheat	cytosol	29.3	35.99
TraesCS2A01G101400.1	Wheat	cytosol	35.21	35.41
TraesCS7A01G464800.1	Wheat	nucleus	30.7	35.39
TraesCS5A01G245900.2	Wheat	nucleus	32.39	35.06
TraesCS5A01G275900.1	Wheat	nucleus	35.21	34.06
TraesCS6A01G378600.1	Wheat	nucleus	29.3	33.99
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	32.39	33.05
TraesCS7A01G152500.1	Wheat	nucleus	32.96	32.87
TraesCS7A01G569300.1	Wheat	cytosol	33.24	32.6
TraesCS2A01G382400.1	Wheat	nucleus	28.17	32.26
TraesCS7A01G189200.1	Wheat	nucleus	31.55	32.09
TraesCS6A01G378500.1	Wheat	nucleus	27.89	31.83
TraesCS7A01G194700.1	Wheat	nucleus	30.99	31.52
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	33.52	31.15
TraesCS7A01G334800.1	Wheat	nucleus	31.27	30.58
TraesCS7A01G247600.1	Wheat	extracellular	28.73	30.27
TraesCS7A01G569100.1	Wheat	nucleus	32.11	30.0
TraesCS2A01G462500.1	Wheat	plastid	27.04	28.66
TraesCS5A01G143100.1	Wheat	nucleus	30.99	27.3

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF12	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2A01G338300	EnsemblPlants:TraesCS2A01G338300.1	SEG:seg

Description

No Description!

Coordinates

chr2A:-:572614847..572616126

Molecular Weight (calculated)

38225.9 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.412

Length

355 amino acids

Sequence
(BLAST)

001: MEHGEQEQHA MDLPPGFRFH PTDEELITHY LAKKVADARF AALAVSVADL NKCEPWDLPS LARMGEKEWY FFCLKDRKYP TGLRTNRATE SGYWKATGKD
101: KDIFRGKALV GMKKTLVFYT GRAPKGDKSG WVMHEYRINA KLHAASTSRG SLSGGRAASS RNEWVLCRVF KKSLLGGVVS SAPASSAAKK SGVGTMEEIG
201: SSVAAVTPLP PLLDMSGSGA SFVDPAAHVT CFSNNALEAG QFFNPTATGG CATDTDHHGL ASSYSPLASF TQYGGQLHHG VSLSLVQLLE SSGYHRGLAD
301: DMAPCGNQQQ QPAACKGERE RLSASQDTGL TSDVNPEISS SFGQKFDHEP APWGY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.