Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G362800.1 | Wheat | nucleus | 91.32 | 91.03 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 84.24 | 85.62 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 77.81 | 81.48 |
| CDY51707 | Canola | cytosol | 33.76 | 66.46 |
| CDX92881 | Canola | cytosol | 33.44 | 63.8 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 57.88 | 60.81 |
| EES07725 | Sorghum | cytosol | 59.16 | 60.73 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 57.23 | 59.73 |
| Os02t0810900-01 | Rice | nucleus | 62.7 | 58.91 |
| GSMUA_Achr11P... | Banana | nucleus | 45.98 | 54.58 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 46.3 | 52.75 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 46.3 | 52.75 |
| GSMUA_Achr11P... | Banana | nucleus | 45.02 | 50.36 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 43.41 | 48.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.19 | 48.64 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 45.34 | 48.45 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 43.09 | 48.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.37 | 47.59 |
| Solyc09g025310.2.1 | Tomato | nucleus | 40.51 | 46.67 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 41.16 | 46.21 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 45.66 | 45.81 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 43.41 | 45.61 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 42.77 | 44.93 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 42.44 | 44.9 |
| PGSC0003DMT400051915 | Potato | cytosol | 39.23 | 42.96 |
| Solyc06g008360.2.1 | Tomato | nucleus | 38.59 | 42.55 |
| PGSC0003DMT400065559 | Potato | nucleus | 38.26 | 42.2 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 31.83 | 40.41 |
| CDY14236 | Canola | cytosol | 41.16 | 38.1 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 26.05 | 37.85 |
| CDX97445 | Canola | cytosol | 40.84 | 37.8 |
| CDY35197 | Canola | nucleus | 40.51 | 37.72 |
| Bra010362.1-P | Field mustard | nucleus | 41.16 | 36.89 |
| CDY38380 | Canola | nucleus | 40.51 | 36.63 |
| Bra011037.1-P | Field mustard | nucleus | 40.51 | 36.63 |
| Bra024194.1-P | Field mustard | nucleus | 41.16 | 36.47 |
| TraesCS7A01G305200.1 | Wheat | cytosol | 32.8 | 35.29 |
| AT4G28530.1 | Thale cress | nucleus | 39.87 | 35.23 |
| TraesCS7A01G464100.1 | Wheat | nucleus | 34.08 | 34.53 |
| TraesCS5A01G049100.2 | Wheat | cytosol, nucleus, peroxisome | 33.12 | 33.66 |
| TraesCS7A01G464800.1 | Wheat | nucleus | 33.12 | 33.44 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 28.94 | 32.61 |
| TraesCS2A01G462500.1 | Wheat | plastid | 33.44 | 31.04 |
| TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 28.94 | 30.1 |
| TraesCS2A01G338300.1 | Wheat | nucleus | 31.83 | 27.89 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 31.83 | 27.27 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 29.26 | 26.61 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 28.62 | 26.41 |
| TraesCS5A01G275900.1 | Wheat | nucleus | 30.87 | 26.16 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 29.26 | 26.15 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 28.94 | 25.5 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 28.94 | 25.28 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 25.72 | 24.39 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 26.37 | 23.5 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 28.62 | 23.3 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 26.05 | 23.21 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 26.69 | 22.93 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 27.97 | 22.89 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 27.97 | 21.59 |
| CDY51708 | Canola | nucleus | 9.32 | 14.57 |
| CDX92880 | Canola | nucleus | 9.0 | 14.14 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF26 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS6A01G378500 | EnsemblPlants:TraesCS6A01G378500.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:599259305..599261850
Molecular Weight (calculated)
34204.1 Da
IEP (calculated)
7.231
GRAVY (calculated)
-0.511
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRDIEMTL PPGFRFYPSD EELVCHYLLS KVANQRLSGG AAGTMVEVDL HVHEPWELPD VAKLTTNEWY FFSFRDRKYT TGLRTNRATR SGYWKATGKD
101: RVIRSLRSSS SRSGRDAIVG MRKTLVFYRG RAPNGIKTCW VMHEFRIENP HSPPKADWVL CRVFHQKKAD TEYAMDGKQE PGGGGVAHKA AAVSGSNYVS
201: SSSCYDPDQY QHSPSAPFPS LGAGGHHYQI TSCDHHHPDG AAGVLHSNVD AFAGMPQLLS YETTLDFSQL PQGGGSAAAG LRDGADDQCG GALMDLGLQV
301: QEAHYNYNSL M
101: RVIRSLRSSS SRSGRDAIVG MRKTLVFYRG RAPNGIKTCW VMHEFRIENP HSPPKADWVL CRVFHQKKAD TEYAMDGKQE PGGGGVAHKA AAVSGSNYVS
201: SSSCYDPDQY QHSPSAPFPS LGAGGHHYQI TSCDHHHPDG AAGVLHSNVD AFAGMPQLLS YETTLDFSQL PQGGGSAAAG LRDGADDQCG GALMDLGLQV
301: QEAHYNYNSL M
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.