Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g008360.2.1 | Tomato | nucleus | 98.23 | 98.23 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 56.74 | 57.76 |
| PGSC0003DMT400051915 | Potato | cytosol | 56.38 | 55.99 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 36.52 | 53.93 |
| GSMUA_Achr11P... | Banana | nucleus | 45.74 | 49.24 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 47.16 | 48.72 |
| GSMUA_Achr11P... | Banana | nucleus | 47.87 | 48.56 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 47.16 | 48.01 |
| Os04t0515900-01 | Rice | nucleus | 47.16 | 47.84 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 46.1 | 47.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.94 | 47.59 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 45.74 | 46.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.2 | 46.3 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 45.39 | 45.39 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 46.45 | 45.02 |
| EES05451 | Sorghum | nucleus | 45.74 | 42.72 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 44.33 | 42.09 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 45.74 | 42.02 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 43.62 | 41.84 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 43.26 | 41.64 |
| EES07725 | Sorghum | cytosol | 44.68 | 41.58 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 43.62 | 41.55 |
| KXG26719 | Sorghum | nucleus | 42.55 | 41.38 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 46.1 | 41.27 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 45.04 | 40.97 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 43.97 | 40.92 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 44.33 | 40.85 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 42.91 | 40.6 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 44.33 | 40.45 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 42.55 | 40.4 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 44.33 | 40.19 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 42.91 | 38.78 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 42.2 | 38.26 |
| Os10t0477600-01 | Rice | nucleus | 43.26 | 37.65 |
| Os02t0810900-01 | Rice | nucleus | 43.26 | 36.86 |
| Os03t0109000-01 | Rice | nucleus | 37.94 | 36.03 |
| PGSC0003DMT400050262 | Potato | nucleus | 35.11 | 29.82 |
| PGSC0003DMT400056916 | Potato | nucleus | 36.52 | 29.51 |
| PGSC0003DMT400083083 | Potato | cytosol | 34.4 | 28.87 |
| PGSC0003DMT400003380 | Potato | nucleus | 32.98 | 28.79 |
| PGSC0003DMT400074048 | Potato | nucleus | 30.85 | 28.52 |
| PGSC0003DMT400013753 | Potato | nucleus | 31.21 | 26.27 |
| PGSC0003DMT400025690 | Potato | nucleus | 32.98 | 26.2 |
| PGSC0003DMT400076103 | Potato | nucleus | 31.21 | 25.29 |
| PGSC0003DMT400032280 | Potato | nucleus | 22.34 | 21.95 |
| PGSC0003DMT400038464 | Potato | nucleus | 30.85 | 11.4 |
Protein Annotations
| EntrezGene:102582287 | MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M1CE89 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| EnsemblPlantsGene:PGSC0003DMG400025505 | PGSC:PGSC0003DMG400025505 | EnsemblPlants:PGSC0003DMT400065559 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF4 |
| SUPFAM:SSF101941 | UniParc:UPI000296672E | RefSeq:XP_015160122.1 | SEG:seg | : | : |
Description
NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025505]
Coordinates
chr6:-:1561107..1567718
Molecular Weight (calculated)
32457.1 Da
IEP (calculated)
5.870
GRAVY (calculated)
-0.617
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRDIGSSL PPGFRFYPSD EELISHYLYK KIANQEVIKG TLVEIDLHTC EPWQLPEMAK LNSNEWYFFS FRDRKYATGF RTNRATISGY WKATGKDRTV
101: FDPQTGALIG MRKTLVFYKN RAPHGIKTGW IMHEFRLENP HIPPKEDWVL CRVFFKGTKD ENINSTNNES TSITSFNMDN HEATMPKLLS YGGGEYRPST
201: LPNYSNNSIY QSQNSSNNLQ LSQEINKVLA NEIIHSKCGK EDEFGFLFDM NYFEESSLQD GGVHSCLDGD MKFEDENSLV FI
101: FDPQTGALIG MRKTLVFYKN RAPHGIKTGW IMHEFRLENP HIPPKEDWVL CRVFFKGTKD ENINSTNNES TSITSFNMDN HEATMPKLLS YGGGEYRPST
201: LPNYSNNSIY QSQNSSNNLQ LSQEINKVLA NEIIHSKCGK EDEFGFLFDM NYFEESSLQD GGVHSCLDGD MKFEDENSLV FI
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.