Factsheet for PGSC0003DMT400038464

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g006020.2.1	Tomato	nucleus	33.68	85.1
PGSC0003DMT400076103	Potato	nucleus	27.13	59.48
Bra007855.1-P	Field mustard	nucleus	23.07	55.52
CDY34773	Canola	nucleus	23.07	55.52
CDX76817	Canola	nucleus	23.07	55.52
Bra032095.1-P	Field mustard	nucleus	23.07	55.52
CDY20314	Canola	nucleus	22.94	55.2
AT2G24430.1	Thale cress	nucleus	22.8	55.06
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	16.38	54.11
VIT_04s0008g02710.t01	Wine grape	nucleus	20.45	48.0
KRH61984	Soybean	nucleus	20.97	44.82
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	20.84	44.79
Os09t0497900-01	Rice	cytosol	19.92	43.18
PGSC0003DMT400074048	Potato	nucleus	17.04	42.62
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	20.31	41.55
PGSC0003DMT400003380	Potato	nucleus	17.56	41.49
GSMUA_Achr8P24680_001	Banana	cytosol	17.17	41.32
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	17.69	41.28
HORVU5Hr1G074810.1	Barley	nucleus	19.0	39.94
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	18.87	39.56
PGSC0003DMT400013753	Potato	nucleus	17.3	39.4
TraesCS5B01G275200.1	Wheat	nucleus	19.0	39.4
TraesCS5A01G275900.1	Wheat	nucleus	18.87	39.24
PGSC0003DMT400083083	Potato	cytosol	17.04	38.69
EER99125	Sorghum	nucleus	19.0	38.56
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	18.87	38.3
PGSC0003DMT400050262	Potato	nucleus	16.64	38.25
Zm00001d006053_P001	Maize	nucleus	19.0	37.37
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	11.66	32.13
PGSC0003DMT400025690	Potato	nucleus	14.81	31.83
PGSC0003DMT400032280	Potato	nucleus	11.8	31.36
PGSC0003DMT400065559	Potato	nucleus	11.4	30.85
PGSC0003DMT400056916	Potato	nucleus	13.89	30.37
PGSC0003DMT400051915	Potato	cytosol	11.27	30.28

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:M1B6X0	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
EnsemblPlantsGene:PGSC0003DMG400014845	PGSC:PGSC0003DMG400014845	EnsemblPlants:PGSC0003DMT400038464	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF50
SUPFAM:SSF101941	UniParc:UPI000295A9EA	SEG:seg	:	:	:

Description

Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400014845]

Coordinates

chr8:-:2653753..2658346

Molecular Weight (calculated)

37405.2 Da

IEP (calculated)

10.141

GRAVY (calculated)

-0.373

Length

763 amino acids

Sequence
(BLAST)

001: MEEVKEETQL PPGFRFHPTD EELITYYLVN KINDVNFTGR AIADVDLNKS EPWDLPGKAK MGGKEWYFFS LRDRKYPTGV RTNRATNSGY WKTTGKDKEI
101: FNSKNNNSEL VGMKKTLVFY KGRAPRGEKS NWVMHEYRIR SKSSYKTNKQ DEWVVCRIFQ KSVGLKKYPT NQYSRATYSL NNTQNNASIM PSQMMQLPHD
201: HQGFQFAMGR NNNNYMNNHG HEIQDLNNRV IFQSGSSNMI NNFPIQPQMS YNIGGGSTSS GAGGGDNNNN YFSISGLNLN LGGGVVASSQ PIFRPMPTPT
301: PTPXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXPP PPPPPPRHMY HHNLWVNKKW LLL

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.