Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 74.83 | 76.87 |
| CDY51707 | Canola | cytosol | 33.77 | 64.56 |
| CDX92881 | Canola | cytosol | 33.44 | 61.96 |
| KXG26719 | Sorghum | nucleus | 57.95 | 60.34 |
| GSMUA_Achr11P... | Banana | nucleus | 50.33 | 58.02 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 51.66 | 57.14 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 50.99 | 56.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.31 | 55.52 |
| GSMUA_Achr11P... | Banana | nucleus | 48.68 | 52.88 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 47.68 | 51.99 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 49.67 | 51.55 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 47.35 | 51.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.38 | 50.97 |
| Solyc09g025310.2.1 | Tomato | nucleus | 43.38 | 48.52 |
| EES02626 | Sorghum | cytosol | 22.85 | 48.25 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 46.69 | 47.96 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 46.36 | 47.3 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 43.38 | 47.29 |
| EES07725 | Sorghum | cytosol | 47.02 | 46.86 |
| PGSC0003DMT400065559 | Potato | nucleus | 42.72 | 45.74 |
| Solyc06g008360.2.1 | Tomato | nucleus | 42.72 | 45.74 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 44.37 | 45.27 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 35.43 | 43.67 |
| PGSC0003DMT400051915 | Potato | cytosol | 41.06 | 43.66 |
| CDY35197 | Canola | nucleus | 42.05 | 38.02 |
| CDY14236 | Canola | cytosol | 41.39 | 37.2 |
| Bra011037.1-P | Field mustard | nucleus | 42.05 | 36.92 |
| CDY38380 | Canola | nucleus | 42.05 | 36.92 |
| CDX97445 | Canola | cytosol | 41.06 | 36.9 |
| Bra010362.1-P | Field mustard | nucleus | 41.72 | 36.31 |
| AT4G28530.1 | Thale cress | nucleus | 42.05 | 36.08 |
| Bra024194.1-P | Field mustard | nucleus | 41.39 | 35.61 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 33.77 | 35.29 |
| EER88807 | Sorghum | nucleus | 34.77 | 34.2 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 33.77 | 33.01 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 34.11 | 30.84 |
| EES14261 | Sorghum | nucleus | 33.77 | 29.91 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 32.78 | 29.03 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 33.44 | 28.37 |
| EES05316 | Sorghum | nucleus | 33.11 | 27.62 |
| EER97754 | Sorghum | nucleus | 30.13 | 27.33 |
| EER99125 | Sorghum | nucleus | 33.77 | 27.13 |
| EER92328 | Sorghum | cytosol | 31.46 | 26.69 |
| OQU89451 | Sorghum | cytosol | 32.78 | 26.61 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 31.79 | 25.88 |
| EES02651 | Sorghum | nucleus | 33.44 | 25.25 |
| KXG23228 | Sorghum | plastid | 37.09 | 25.23 |
| EES17917 | Sorghum | cytosol | 33.44 | 25.12 |
| KXG28193 | Sorghum | cytosol | 23.18 | 25.0 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 32.12 | 24.43 |
| CDX92880 | Canola | nucleus | 9.93 | 15.15 |
| CDY51708 | Canola | nucleus | 9.6 | 14.57 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8066160 | UniProt:C5XXS9 | EnsemblPlants:EES05451 | ProteinID:EES05451 |
| ProteinID:EES05451.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF4 |
| EnsemblPlantsGene:SORBI_3004G219500 | SUPFAM:SSF101941 | UniParc:UPI0001A85428 | RefSeq:XP_002452475.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:56881290..56884644
Molecular Weight (calculated)
33101.3 Da
IEP (calculated)
6.125
GRAVY (calculated)
-0.570
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MALREIESTL PPGFRFYPSD EELVCHYLHK KVANERIAQG TLVEVDLHAR EPWELPEVAK LTATEWYFFS FRDRKYATGS RTNRATKTGY WKATGKDREV
101: RSSSSSGAVV GMRKTLVFYR GRAPNGVKSG WVMHEFRLDT PHSPPREDWV LCRVFQKTKG DGGDGQDGDY SSSSPAFAGT SQAMPDPDYY SAASSAGSGY
201: YGLAFAPPPP QQQEEVAAPV LPQYYYGGTV DVDHHHHHHG FTRDDNVGAA LPGFGGAMMR GSSVAAGGDQ YGFGYFDMGG GGFDDMASFG GGDMDFVPQV
301: WS
101: RSSSSSGAVV GMRKTLVFYR GRAPNGVKSG WVMHEFRLDT PHSPPREDWV LCRVFQKTKG DGGDGQDGDY SSSSPAFAGT SQAMPDPDYY SAASSAGSGY
201: YGLAFAPPPP QQQEEVAAPV LPQYYYGGTV DVDHHHHHHG FTRDDNVGAA LPGFGGAMMR GSSVAAGGDQ YGFGYFDMGG GGFDDMASFG GGDMDFVPQV
301: WS
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.