CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90487
KXG38822

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04060.1	EER90487	AT1G32230.1	19548978
AT3G04060.1	KXG38822	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028995_P001	Maize	cytosol	88.76	90.03
Zm00001d047554_P001	Maize	cytoskeleton, cytosol, nucleus	87.92	89.94
TraesCS4B01G174000.1	Wheat	cytosol	74.16	77.42
TraesCS4D01G176000.1	Wheat	nucleus	73.88	76.9
TraesCS4A01G130600.1	Wheat	nucleus	73.6	76.61
HORVU4Hr1G051360.3	Barley	nucleus	73.03	75.14
Os03t0327100-01	Rice	nucleus	70.22	69.83
CDY29982	Canola	cytosol	31.74	65.7
EES02626	Sorghum	cytosol	23.03	57.34
GSMUA_Achr10P...	Banana	cytosol	35.11	54.82
EER97754	Sorghum	nucleus	50.0	53.45
GSMUA_Achr5P07600_001	Banana	cytosol	36.24	52.44
GSMUA_Achr6P08600_001	Banana	nucleus	47.19	48.41
GSMUA_Achr9P16920_001	Banana	cytosol	41.57	48.37
CDY53250	Canola	nucleus	45.51	48.21
CDY02636	Canola	nucleus	45.51	48.07
AT5G18270.1	Thale cress	nucleus	45.22	48.06
Bra023669.1-P	Field mustard	nucleus	45.22	47.92
Bra002148.1-P	Field mustard	nucleus	44.94	47.62
GSMUA_Achr6P32290_001	Banana	nucleus	46.07	47.4
GSMUA_Achr3P09520_001	Banana	cytosol	42.13	47.17
Bra006449.1-P	Field mustard	nucleus	44.38	47.02
GSMUA_Achr3P18020_001	Banana	nucleus	38.48	46.76
GSMUA_Achr7P18330_001	Banana	nucleus	40.45	46.75
CDY51238	Canola	nucleus	44.1	46.59
CDX70804	Canola	nucleus	44.1	46.59
Bra040153.1-P	Field mustard	nucleus	43.54	45.19
AT3G04060.1	Thale cress	nucleus	42.42	44.67
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	42.7	44.19
CDY50879	Canola	cytoskeleton, cytosol, nucleus	42.42	44.02
CDY42901	Canola	nucleus	41.57	43.02
VIT_08s0007g07640.t01	Wine grape	nucleus	47.75	42.18
KRG94783	Soybean	nucleus	46.35	40.74
KRH06738	Soybean	nucleus	46.07	40.29
KRH08479	Soybean	nucleus	45.22	39.27
KRH70130	Soybean	nucleus	44.94	39.02
EES10946	Sorghum	cytosol, mitochondrion, nucleus	37.36	37.36
EES05316	Sorghum	nucleus	37.36	36.74
EER93792	Sorghum	cytosol, mitochondrion, nucleus	33.99	35.48
EES13494	Sorghum	cytosol, nucleus, plastid	27.53	33.91
EER99125	Sorghum	nucleus	35.11	33.24
OQU89451	Sorghum	cytosol	34.55	33.06
OQU82346	Sorghum	cytosol, nucleus, plastid	28.65	33.01
EES07908	Sorghum	nucleus, peroxisome, plastid	36.52	32.75
EER88807	Sorghum	nucleus	28.09	32.57
EES05451	Sorghum	nucleus	26.69	31.46
EES17917	Sorghum	cytosol	35.39	31.34
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	32.3	31.0
OQU79579	Sorghum	cytosol, nucleus, peroxisome	28.93	30.84
EES02651	Sorghum	nucleus	34.55	30.75
KXG26719	Sorghum	nucleus	25.0	30.69
EES07725	Sorghum	cytosol	25.84	30.36
EES14261	Sorghum	nucleus	28.37	29.62
KXG23228	Sorghum	plastid	34.83	27.93
GSMUA_Achr8P21470_001	Banana	nucleus	38.76	26.74
KXG28193	Sorghum	cytosol	19.66	25.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8083682	UniProt:C5X1Q2	EnsemblPlants:EER92328	ProteinID:EER92328
ProteinID:EER92328.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF47
EnsemblPlantsGene:SORBI_3001G386000	SUPFAM:SSF101941	unigene:Sbi.7063	UniParc:UPI0001A82AA9	RefSeq:XP_002465330.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:67344332..67346402

Molecular Weight (calculated)

39250.5 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.429

Length

356 amino acids

Sequence
(BLAST)

001: MSEVSVINQA EVEDAGAAGQ LDLPPGFRFH PTDEEIISHY LTHKALNHRF ISGVIGEVDL NKCEPWDLPG RAKMGEKEWY FFCHKDRKYP TGTRTNRATE
101: TGYWKATGKD KEIFRGRGIL VGMKKTLVFY RGRAPRGEKT GWVMHEFRLE GKLPQPLPRS AKDEWAVCKV FNKELAARTE PMAAAVAGAE LERVGSLGFL
201: NELLDSAELP ALIGADVDEV IDFKGPASTS GLHAGAPGTS YLPVKMEEHA LLQQMQYQQQ PPPMFYSSQY FSLPAMNSGD LPPAIRRYCK AEQQVVSSGQ
301: TASVVSPSRE TGLSTDRNAA GGGYAEISSA VTPSSSHQFL PELDDPVLNL ADLWKY

Best Arabidopsis Sequence Match ( AT5G18270.1 )
(BLAST)

001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF

Arabidopsis Description

ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.