CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024268_P001	Maize	cytosol, nucleus, plastid	83.74	85.82
TraesCS7D01G302000.1	Wheat	cytosol	66.78	66.32
TraesCS7B01G205600.1	Wheat	cytosol	66.44	65.75
TraesCS7A01G305200.1	Wheat	cytosol	65.4	65.4
Os08t0200600-01	Rice	nucleus	65.74	64.85
HORVU7Hr1G072670.3	Barley	cytosol, plastid	65.74	55.72
GSMUA_Achr5P00500_001	Banana	nucleus	50.17	52.92
GSMUA_Achr3P23360_001	Banana	nucleus	50.52	52.14
GSMUA_Achr11P...	Banana	nucleus	49.48	51.25
OQU82346	Sorghum	cytosol, nucleus, plastid	52.25	48.87
EER88807	Sorghum	nucleus	51.9	48.86
GSMUA_Achr5P26640_001	Banana	nucleus	50.17	48.49
GSMUA_Achr8P33310_001	Banana	nucleus	47.4	48.41
GSMUA_Achr8P07120_001	Banana	nucleus	48.79	46.84
CDY51910	Canola	nucleus	39.79	46.0
EES02626	Sorghum	cytosol	21.8	44.06
KRH43817	Soybean	nucleus	45.67	43.71
KRH13649	Soybean	nucleus	45.67	43.56
Bra034713.1-P	Field mustard	nucleus	41.18	43.27
CDY60115	Canola	nucleus	41.52	43.01
CDX82566	Canola	nucleus	41.18	42.96
Bra001480.1-P	Field mustard	nucleus	40.83	42.6
AT3G12977.1	Thale cress	nucleus	40.83	42.29
CDY23558	Canola	nucleus	39.79	41.97
VIT_19s0027g00230.t01	Wine grape	nucleus	42.56	41.69
OQU79579	Sorghum	cytosol, nucleus, peroxisome	47.06	40.72
CDY10515	Canola	nucleus	43.94	39.44
Bra030820.1-P	Field mustard	nucleus	43.6	39.25
CDY42401	Canola	nucleus	43.6	39.25
AT1G56010.2	Thale cress	nucleus	43.94	39.2
Solyc07g066330.2.1	Tomato	nucleus	43.6	36.84
PGSC0003DMT400056916	Potato	nucleus	42.91	35.53
EES05451	Sorghum	nucleus	35.29	33.77
KXG26719	Sorghum	nucleus	33.22	33.1
EES07725	Sorghum	cytosol	34.6	33.0
KXG28193	Sorghum	cytosol	30.8	31.79
EER93792	Sorghum	cytosol, mitochondrion, nucleus	36.33	30.79
EES05316	Sorghum	nucleus	38.06	30.39
EES10946	Sorghum	cytosol, mitochondrion, nucleus	37.37	30.34
EER97754	Sorghum	nucleus	34.95	30.33
EER92328	Sorghum	cytosol	33.91	27.53
EES14261	Sorghum	nucleus	31.83	26.98
OQU89451	Sorghum	cytosol	33.22	25.81
KXG28945	Sorghum	cytoskeleton, nucleus, peroxisome	32.87	25.61
EER99125	Sorghum	nucleus	33.22	25.53
EES02651	Sorghum	nucleus	33.56	24.25
EES17917	Sorghum	cytosol	32.87	23.63
EES07908	Sorghum	nucleus, peroxisome, plastid	32.18	23.43
KXG23228	Sorghum	plastid	35.64	23.2

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8085025	UniProt:C5YIE8	EnsemblPlants:EES13494	ProteinID:EES13494
ProteinID:EES13494.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF21
EnsemblPlantsGene:SORBI_3007G071000	SUPFAM:SSF101941	unigene:Sbi.15831	UniParc:UPI0001A8751D	RefSeq:XP_002443999.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:7871028..7874296

Molecular Weight (calculated)

31562.3 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.392

Length

289 amino acids

Sequence
(BLAST)

001: MSSSISMMEA RMPPGFRFHP RDDELVLDYL LDKLSGHGHG GGAAIVDVDL NKCEPWDLPE SACVGGKEWY FFNLRDRKYA TGQRTNRATR SGYWKATGKD
101: RAVVAGGDGG EDAAAVVGMR KTLVFYRGRA PKGRKTEWVM HEFRLHPHAA PSLPAAATKE DWVLCRVFYK SRTTTPRPAS DDAQDGTPSA EPQLSAALPL
201: GPLADTYTAF GGAPTVFEQV SCFSGLPALP FKRPVSLGDL LAFDTSEKES IGTVMSSVSN NSSSVLELTP NCNWNQENDM LQMWNPLGI

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.