Factsheet for Bra001480.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82566	Canola	nucleus	99.28	99.28
CDY51910	Canola	nucleus	86.64	96.0
Bra034713.1-P	Field mustard	nucleus	83.39	84.0
AT3G12977.1	Thale cress	nucleus	80.87	80.29
Bra030820.1-P	Field mustard	nucleus	71.48	61.68
KRH43817	Soybean	nucleus	60.29	55.3
KRH13649	Soybean	nucleus	59.93	54.79
VIT_19s0027g00230.t01	Wine grape	nucleus	54.15	50.85
GSMUA_Achr9P10210_001	Banana	nucleus	42.6	48.96
Os06t0675600-01	Rice	nucleus	50.9	46.38
GSMUA_Achr6P30050_001	Banana	nucleus	47.29	45.96
GSMUA_Achr5P00500_001	Banana	nucleus	45.13	45.62
Solyc07g066330.2.1	Tomato	nucleus	56.32	45.61
GSMUA_Achr6P31350_001	Banana	nucleus	48.01	44.63
TraesCS7A01G464100.1	Wheat	nucleus	49.46	44.63
HORVU7Hr1G106480.1	Barley	nucleus	49.1	44.3
GSMUA_Achr3P23360_001	Banana	nucleus	44.77	44.29
TraesCS7B01G365300.1	Wheat	nucleus	48.74	44.26
GSMUA_Achr8P33310_001	Banana	nucleus	45.13	44.17
PGSC0003DMT400056916	Potato	nucleus	55.6	44.13
TraesCS7B01G364600.1	Wheat	nucleus	48.74	43.97
TraesCS7D01G451700.1	Wheat	nucleus	49.46	43.91
EER88807	Sorghum	nucleus	48.38	43.65
Zm00001d014405_P001	Maize	nucleus	48.01	43.61
TraesCS7D01G452500.1	Wheat	nucleus	48.38	43.51
TraesCS7A01G464800.1	Wheat	nucleus	48.38	43.51
GSMUA_Achr5P26640_001	Banana	nucleus	46.57	43.14
GSMUA_Achr11P...	Banana	nucleus	43.32	43.01
Os08t0200600-01	Rice	nucleus	45.49	43.0
TraesCS5D01G059700.2	Wheat	cytosol, nucleus, peroxisome	46.21	42.24
GSMUA_Achr9P26140_001	Banana	cytosol	47.65	41.9
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	46.21	41.83
TraesCS5B01G054200.2	Wheat	cytosol, nucleus, peroxisome	46.21	41.69
TraesCS7D01G302000.1	Wheat	cytosol	43.68	41.58
GSMUA_Achr8P07120_001	Banana	nucleus	45.13	41.53
TraesCS7A01G305200.1	Wheat	cytosol	43.32	41.52
TraesCS7B01G205600.1	Wheat	cytosol	43.68	41.44
TraesCS2B01G484100.1	Wheat	cytosol, nucleus, plastid	42.96	41.32
Zm00001d024268_P001	Maize	cytosol, nucleus, plastid	41.88	41.13
EES13494	Sorghum	cytosol, nucleus, plastid	42.6	40.83
TraesCS2D01G462900.1	Wheat	cytosol, nucleus, plastid	41.16	39.04
Bra009246.1-P	Field mustard	nucleus	38.99	38.16
HORVU2Hr1G103930.1	Barley	mitochondrion	40.43	37.97
Os12t0610600-01	Rice	nucleus	44.77	37.24
HORVU7Hr1G106660.9	Barley	nucleus, plastid	48.74	37.19
OQU82346	Sorghum	cytosol, nucleus, plastid	41.16	36.89
OQU79579	Sorghum	cytosol, nucleus, peroxisome	44.4	36.83
Zm00001d002285_P001	Maize	cytosol, nucleus, plastid	41.52	36.28
HORVU7Hr1G072670.3	Barley	cytosol, plastid	44.04	35.78
Bra028435.1-P	Field mustard	nucleus	37.18	35.76
Zm00001d041472_P001	Maize	cytosol, nucleus, peroxisome	42.96	35.1
Bra028685.1-P	Field mustard	nucleus	39.71	35.03
Bra025658.1-P	Field mustard	nucleus	36.46	34.95
TraesCS2A01G462500.1	Wheat	plastid	41.52	34.33
Bra029313.1-P	Field mustard	nucleus	38.63	32.92
Bra012960.1-P	Field mustard	nucleus	38.63	32.72
Bra001586.1-P	Field mustard	nucleus	36.46	32.69
Bra021592.1-P	Field mustard	nucleus	35.74	32.67
Bra037585.1-P	Field mustard	nucleus	33.94	31.33
Bra001705.1-P	Field mustard	nucleus	33.57	31.1
Bra025374.1-P	Field mustard	cytoskeleton, cytosol, nucleus	34.66	31.07
Bra022319.1-P	Field mustard	nucleus	33.94	30.62
Bra036223.1-P	Field mustard	nucleus	35.74	30.18
Bra008259.1-P	Field mustard	cytosol	34.3	29.69
KXG28193	Sorghum	cytosol	29.96	29.64
Bra023669.1-P	Field mustard	nucleus	35.74	29.46
Bra032095.1-P	Field mustard	nucleus	33.57	29.34
Bra007855.1-P	Field mustard	nucleus	33.57	29.34
Bra002148.1-P	Field mustard	nucleus	35.38	29.17
Bra011037.1-P	Field mustard	nucleus	36.1	29.07
Bra015750.1-P	Field mustard	cytosol	34.66	28.66
Bra006449.1-P	Field mustard	nucleus	34.66	28.57
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	35.38	28.49
Bra022685.1-P	Field mustard	nucleus	36.82	27.79
Bra003023.1-P	Field mustard	nucleus	35.74	27.73
Bra024194.1-P	Field mustard	nucleus	35.02	27.64
Bra040153.1-P	Field mustard	nucleus	33.94	27.41
Bra010362.1-P	Field mustard	nucleus	34.3	27.38

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra001480	EnsemblPlants:Bra001480.1	EnsemblPlants:Bra001480.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4CBA0	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF5	SUPFAM:SSF101941
UniParc:UPI0002540813	SEG:seg	:	:	:	:

Description

AT3G12977 (E=3e-118) | DNA binding

Coordinates

chrA03:+:16601772..16603851

Molecular Weight (calculated)

31909.7 Da

IEP (calculated)

9.302

GRAVY (calculated)

-0.778

Length

277 amino acids

Sequence
(BLAST)

001: MEVKEDTKGS ISMVEANLPP GFRFHPRDDE LVCDYLMKRT VRSLYQPVVL IEVDLNKCEP WDIPQTARVG CKEWYFYSQK DLKYATGQRT NRATATGYWK
101: ATGKDRSIHR NGSLVGMRKT LVFYKGRAPK GRKTDWVMHE FRLQGTFFHH PPNPLKEEWV LCRVFHKNNN EVDRDNNMRS CSNQTVSVSM DSYINFDHHH
201: IINQQVPCFS NLNQTNQSGF VSKNPNPLSK PSSDQMVLRA VLSQLTKSGK ESQSYGEGSS ESQLTDIGIP NHNAWKY

Best Arabidopsis Sequence Match ( AT3G12977.1 )
(BLAST)

001: MEETEKNKGS ISMVEANLPP GFRFHPRDDE LVCDYLMRRT VRSLYQPVVL IDVDLNKCEP WDIPQTARVG GKEWYFYSQK DRKYATGYRT NRATATGYWK
101: ATGKDRAIQR NGGLVGMRKT LVFYRGRSPK GRKTDWVMHE FRLQGKLLHH SPNSLEEEWV LCRVFHKNSN GADIDDITRS CSDATASAFM DSYINFDHHH
201: IINQHVPCFS NNLSHNQTNQ SGLISKNSSP LFNASPDQMI LRTLLSQLTK KVEESQSRGD GSSESQLTDI GIPSHAWNY

Arabidopsis Description

NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.