Factsheet for Bra012960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56940	Canola	nucleus	98.17	98.17
AT5G61430.1	Thale cress	nucleus	93.58	91.07
Bra029313.1-P	Field mustard	nucleus	86.24	86.77
Bra009246.1-P	Field mustard	nucleus	66.67	77.03
Bra028685.1-P	Field mustard	nucleus	73.7	76.75
KRH56898	Soybean	nucleus	63.61	59.43
VIT_17s0000g06400.t01	Wine grape	nucleus	65.14	59.17
KRH03497	Soybean	nucleus	63.0	58.86
Bra028435.1-P	Field mustard	nucleus	48.93	55.56
Bra025658.1-P	Field mustard	nucleus	47.71	53.98
Bra036223.1-P	Field mustard	nucleus	51.07	50.91
Bra025374.1-P	Field mustard	cytoskeleton, cytosol, nucleus	47.09	49.84
Bra006449.1-P	Field mustard	nucleus	45.87	44.64
Bra002148.1-P	Field mustard	nucleus	45.57	44.35
Bra023669.1-P	Field mustard	nucleus	45.57	44.35
Bra001586.1-P	Field mustard	nucleus	41.59	44.01
Bra037585.1-P	Field mustard	nucleus	39.76	43.33
Bra021592.1-P	Field mustard	nucleus	40.06	43.23
Bra007855.1-P	Field mustard	nucleus	41.59	42.9
Bra032095.1-P	Field mustard	nucleus	41.28	42.59
Bra001705.1-P	Field mustard	nucleus	38.84	42.47
Bra031950.1-P	Field mustard	cytoskeleton, cytosol, nucleus	44.04	41.86
Bra040153.1-P	Field mustard	nucleus	43.43	41.4
Bra022319.1-P	Field mustard	nucleus	38.84	41.37
Bra034713.1-P	Field mustard	nucleus	33.33	39.64
Bra003023.1-P	Field mustard	nucleus	42.81	39.22
Bra001480.1-P	Field mustard	nucleus	32.72	38.63
Bra008259.1-P	Field mustard	cytosol	37.61	38.44
Bra022685.1-P	Field mustard	nucleus	42.51	37.87
Bra015750.1-P	Field mustard	cytosol	37.61	36.72
Bra030820.1-P	Field mustard	nucleus	33.33	33.96
Bra011037.1-P	Field mustard	nucleus	30.58	29.07
Bra024194.1-P	Field mustard	nucleus	30.89	28.77
Bra010362.1-P	Field mustard	nucleus	29.97	28.24

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra012960	EnsemblPlants:Bra012960.1	EnsemblPlants:Bra012960.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4D900	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF7	SUPFAM:SSF101941
UniParc:UPI0002540573	:	:	:	:	:

Description

AT5G61430 (E=4e-180) ANAC100, ATNAC5 | ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100); transcription factor

Coordinates

chrA03:-:21320433..21321577

Molecular Weight (calculated)

37141.0 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.666

Length

327 amino acids

Sequence
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI SHYLHKKVLD ISFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKLSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLMPSLTDAS
201: PFNEKTKTEP GYVPCFSNQT DQAQGNPLNC FSSPDIFHRI PLYQTQSLQV SGNLQSPILG QEHSVLHAMI DNNTRQSLKG MSVSQETAVS TDMNTDISSD
301: FEYGKRRAQE DPSSSAGPVD LEPFWNY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.