Factsheet for Os06t0675600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G106480.1	Barley	nucleus	82.24	81.43
TraesCS7B01G365300.1	Wheat	nucleus	81.58	81.31
TraesCS7B01G364600.1	Wheat	nucleus	81.91	81.11
TraesCS7D01G452500.1	Wheat	nucleus	81.91	80.84
EER88807	Sorghum	nucleus	81.58	80.78
TraesCS7A01G464800.1	Wheat	nucleus	81.58	80.52
TraesCS7A01G464100.1	Wheat	nucleus	81.25	80.46
Zm00001d014405_P001	Maize	nucleus	79.93	79.67
TraesCS7D01G451700.1	Wheat	nucleus	81.58	79.49
HORVU7Hr1G106660.9	Barley	nucleus, plastid	80.26	67.22
GSMUA_Achr3P23360_001	Banana	nucleus	55.59	60.36
GSMUA_Achr8P33310_001	Banana	nucleus	54.61	58.66
Os08t0200600-01	Rice	nucleus	54.61	56.66
GSMUA_Achr11P...	Banana	nucleus	51.97	56.63
GSMUA_Achr5P00500_001	Banana	nucleus	50.66	56.2
GSMUA_Achr5P26640_001	Banana	nucleus	54.28	55.18
KRH13649	Soybean	nucleus	52.96	53.14
CDY51910	Canola	nucleus	43.09	52.4
KRH43817	Soybean	nucleus	51.97	52.32
CDX82566	Canola	nucleus	46.71	51.26
Bra001480.1-P	Field mustard	nucleus	46.38	50.9
GSMUA_Achr8P07120_001	Banana	nucleus	50.33	50.83
Bra034713.1-P	Field mustard	nucleus	45.39	50.18
AT3G12977.1	Thale cress	nucleus	45.72	49.82
CDY60115	Canola	nucleus	45.72	49.82
CDY23558	Canola	nucleus	44.08	48.91
VIT_19s0027g00230.t01	Wine grape	nucleus	46.71	48.14
Bra030820.1-P	Field mustard	nucleus	49.01	46.42
CDY42401	Canola	nucleus	49.01	46.42
AT1G56010.2	Thale cress	nucleus	49.01	45.99
CDY10515	Canola	nucleus	48.68	45.96
Os12t0610600-01	Rice	nucleus	49.34	45.05
Solyc07g066330.2.1	Tomato	nucleus	49.67	44.15
PGSC0003DMT400056916	Potato	nucleus	49.67	43.27
Os04t0515900-01	Rice	nucleus	36.51	39.93
Os03t0109000-01	Rice	nucleus	33.55	34.34
Os04t0460600-02	Rice	cytosol, mitochondrion, nucleus	38.16	33.82
Os07t0684800-01	Rice	cytosol	33.22	33.55
Os10t0477600-01	Rice	nucleus	35.53	33.33
Os02t0810900-01	Rice	nucleus	35.53	32.63
Os02t0579000-01	Rice	mitochondrion	36.18	31.88
Os01t0104500-01	Rice	cytosol, mitochondrion, nucleus	32.89	31.25
Os03t0624600-01	Rice	cytosol, mitochondrion, nucleus	32.57	30.65
Os01t0393100-01	Rice	nucleus	32.89	30.49
Os03t0327100-01	Rice	nucleus	34.87	29.61
Os09t0497900-01	Rice	cytosol	34.21	29.55
Os08t0511200-00	Rice	cytosol	33.22	29.11
Os06t0344900-00	Rice	cytosol, nucleus, plastid	35.2	28.69
Os12t0123800-01	Rice	nucleus	35.86	27.53
Os11t0127000-01	Rice	nucleus	24.34	25.08

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:4341823	EMBL:AK063648	ProteinID:BAD45909.1	ProteinID:BAF20260.1
ProteinID:BAS99102.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlantsGene:Os06g0675600	EnsemblPlants:Os06t0675600-01	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF45	UniProt:Q653V8	SUPFAM:SSF101941	UniParc:UPI000043A450	RefSeq:XP_015643121.1
RefSeq:XP_015643122.1	SEG:seg	:	:	:	:

Description

NAC DOMAIN-CONTAINING PROTEIN 11Similar to GRAB2 protein. (Os06t0675600-01)

Coordinates

chr6:+:28037569..28041881

Molecular Weight (calculated)

34085.5 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.527

Length

304 amino acids

Sequence
(BLAST)

001: MSGMNSLSMV EARLPPGFRF HPRDDELVLD YLERKLLDGG VGGAAAAAAA VTIYGCPVMV DVDLNKCEPW DLPEIACVGG KEWYFYSLRD RKYATGQRTN
101: RATESGYWKA TGKDRPISRK GLLVGMRKTL VFYKGRAPKG KKTEWVMHEF RKEGQGDPMK LPLKEDWVLC RVFYKSRTTI AKLPTEGSYN NIDSVATTSL
201: PPLTDNYIAF DQPGSMQNLE GYEQVPCFSN NPSQQPSSSM NVPLTSAMVD QEQNNMGRAI KDVLSQFTKF EGNVKREALQ SNFSQDGFDY LAESGFTQMW
301: NSLS

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.