Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0854800-03 | |
| Os10t0577800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | Os03t0854800-03 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | Os10t0577800-01 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0123800-01 | Rice | nucleus | 79.32 | 59.09 |
| CDY29982 | Canola | cytosol | 21.02 | 36.05 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 42.37 | 31.49 |
| Zm00001d005028_P001 | Maize | cytosol | 33.56 | 30.75 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 24.75 | 29.67 |
| Zm00001d052390_P001 | Maize | nucleus | 36.95 | 29.38 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 40.0 | 29.28 |
| GSMUA_Achr10P... | Banana | cytosol | 22.37 | 28.95 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 39.32 | 28.86 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 38.98 | 28.68 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 28.47 | 27.27 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 27.12 | 26.14 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 40.0 | 25.93 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 27.46 | 25.47 |
| Os07t0684800-01 | Rice | cytosol | 25.42 | 24.92 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 24.75 | 24.91 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 29.15 | 24.78 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 26.78 | 24.69 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 28.81 | 24.57 |
| CDY53250 | Canola | nucleus | 27.8 | 24.4 |
| Bra023669.1-P | Field mustard | nucleus | 27.8 | 24.4 |
| Os06t0675600-01 | Rice | nucleus | 25.08 | 24.34 |
| CDY02636 | Canola | nucleus | 27.8 | 24.33 |
| AT5G18270.1 | Thale cress | nucleus | 27.46 | 24.18 |
| Bra006449.1-P | Field mustard | nucleus | 27.46 | 24.11 |
| CDY51238 | Canola | nucleus | 27.46 | 24.04 |
| CDX70804 | Canola | nucleus | 27.46 | 24.04 |
| AT3G04060.1 | Thale cress | nucleus | 27.46 | 23.96 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 27.8 | 23.91 |
| Os08t0200600-01 | Rice | nucleus | 23.73 | 23.89 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 27.8 | 23.84 |
| Bra002148.1-P | Field mustard | nucleus | 27.12 | 23.81 |
| Os01t0393100-01 | Rice | nucleus | 26.44 | 23.78 |
| Os04t0515900-01 | Rice | nucleus | 22.37 | 23.74 |
| CDY42901 | Canola | nucleus | 27.12 | 23.26 |
| Bra040153.1-P | Field mustard | nucleus | 26.78 | 23.03 |
| KRG94783 | Soybean | nucleus | 31.53 | 22.96 |
| Os09t0497900-01 | Rice | cytosol | 27.12 | 22.73 |
| KRH06738 | Soybean | nucleus | 31.19 | 22.6 |
| Os03t0327100-01 | Rice | nucleus | 26.78 | 22.07 |
| Os04t0460600-02 | Rice | cytosol, mitochondrion, nucleus | 25.42 | 21.87 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 29.83 | 21.84 |
| KRH08479 | Soybean | nucleus | 30.17 | 21.71 |
| Os03t0624600-01 | Rice | cytosol, mitochondrion, nucleus | 23.73 | 21.67 |
| KRH70130 | Soybean | nucleus | 29.83 | 21.46 |
| Os02t0579000-01 | Rice | mitochondrion | 25.08 | 21.45 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 26.44 | 20.91 |
| Os02t0810900-01 | Rice | nucleus | 23.39 | 20.85 |
| Os12t0610600-01 | Rice | nucleus | 22.37 | 19.82 |
| Os08t0511200-00 | Rice | cytosol | 23.05 | 19.6 |
| Os03t0109000-01 | Rice | nucleus | 19.66 | 19.53 |
| Os10t0477600-01 | Rice | nucleus | 20.34 | 18.52 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 31.19 | 17.83 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A0P0XYU9 | ProteinID:BAT12486.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os11g0127000 |
| EnsemblPlants:Os11t0127000-01 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 | SUPFAM:SSF101941 |
| UniParc:UPI0003938982 | SEG:seg | : | : | : | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 123Similar to NAC domain-containing protein 77. (Os11t0127000-01)
Coordinates
chr11:+:1240063..1245394
Molecular Weight (calculated)
32926.2 Da
IEP (calculated)
8.211
GRAVY (calculated)
-0.778
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: IEITAARMGN NEWYFSRKDM KYPTGMRTNR ATKEGYWKAT GKDREIFKPA IYEGSSKNNK QLVGMKKTLV FYMGRAPKGT RTNWVMHEFR PHANLHNHYP
101: NLRLNPNEWV VCKVFHKKQG DEAINNQQQQ PAVDQADDDD IFQLDDIFAD PSIYDFSNSS ANILSAPPNN NAVHSSVSAG TTMTSTTTAS SFQHQPNCYS
201: APLQQHVSSW NNTPGAGGAH GIGSSYYNLQ QQQQQAAMVK DLEDIIAVPD YGTLLPSSNK GSSIRSATAG VSQQNPLGVP QYKIENYGDH YISRE
101: NLRLNPNEWV VCKVFHKKQG DEAINNQQQQ PAVDQADDDD IFQLDDIFAD PSIYDFSNSS ANILSAPPNN NAVHSSVSAG TTMTSTTTAS SFQHQPNCYS
201: APLQQHVSSW NNTPGAGGAH GIGSSYYNLQ QQQQQAAMVK DLEDIIAVPD YGTLLPSSNK GSSIRSATAG VSQQNPLGVP QYKIENYGDH YISRE
001: MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.