Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02626 | Sorghum | cytosol | 27.11 | 76.22 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 70.9 | 72.89 |
| EES02651 | Sorghum | nucleus | 70.9 | 71.25 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 61.44 | 66.58 |
| OQU89451 | Sorghum | cytosol | 59.95 | 64.78 |
| CDY29982 | Canola | cytosol | 23.63 | 55.23 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 26.87 | 49.77 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 25.87 | 48.6 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 25.62 | 48.36 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 28.61 | 46.75 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 26.12 | 46.67 |
| GSMUA_Achr10P... | Banana | cytosol | 26.37 | 46.49 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 33.33 | 41.88 |
| Os01t0393100-01 | Rice | nucleus | 33.08 | 40.55 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 27.11 | 39.93 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 28.86 | 39.59 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 29.6 | 38.64 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 29.35 | 38.56 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 32.84 | 38.04 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 29.85 | 37.74 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 33.08 | 37.36 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 33.08 | 37.36 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 32.84 | 37.29 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 33.08 | 37.25 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 32.09 | 36.96 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 30.1 | 36.89 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 29.6 | 36.84 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 31.59 | 36.6 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 30.6 | 36.18 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 31.34 | 36.1 |
| CDY02636 | Canola | nucleus | 30.1 | 35.91 |
| CDX70804 | Canola | nucleus | 30.1 | 35.91 |
| CDY53250 | Canola | nucleus | 29.85 | 35.71 |
| Bra023669.1-P | Field mustard | nucleus | 29.85 | 35.71 |
| Bra002148.1-P | Field mustard | nucleus | 29.85 | 35.71 |
| Bra006449.1-P | Field mustard | nucleus | 29.6 | 35.42 |
| EER92328 | Sorghum | cytosol | 31.34 | 35.39 |
| CDY51238 | Canola | nucleus | 29.6 | 35.31 |
| AT5G18270.1 | Thale cress | nucleus | 29.35 | 35.22 |
| EER97754 | Sorghum | nucleus | 29.1 | 35.14 |
| AT3G04060.1 | Thale cress | nucleus | 29.35 | 34.91 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 29.85 | 34.68 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 31.09 | 34.53 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.59 | 34.32 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 29.1 | 34.11 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 29.35 | 34.1 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 29.1 | 34.01 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 29.6 | 34.0 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 32.09 | 33.95 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 30.1 | 33.89 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 27.11 | 33.75 |
| CDY42901 | Canola | nucleus | 28.86 | 33.72 |
| Bra040153.1-P | Field mustard | nucleus | 28.61 | 33.53 |
| EES05451 | Sorghum | nucleus | 25.12 | 33.44 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 31.59 | 33.42 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 29.35 | 33.15 |
| EER99125 | Sorghum | nucleus | 30.85 | 32.98 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 28.61 | 32.95 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 23.63 | 32.87 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 27.86 | 32.84 |
| KRG94783 | Soybean | nucleus | 33.08 | 32.84 |
| KXG26719 | Sorghum | nucleus | 23.63 | 32.76 |
| EER88807 | Sorghum | nucleus | 24.88 | 32.57 |
| EES14261 | Sorghum | nucleus | 27.61 | 32.55 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 30.35 | 32.36 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 32.09 | 32.01 |
| KRH06738 | Soybean | nucleus | 32.34 | 31.94 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 20.9 | 31.34 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 23.88 | 31.07 |
| EES05316 | Sorghum | nucleus | 27.36 | 30.39 |
| EES07725 | Sorghum | cytosol | 22.64 | 30.03 |
| KRH70130 | Soybean | nucleus | 30.35 | 29.76 |
| KRH08479 | Soybean | nucleus | 29.85 | 29.27 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 24.13 | 29.04 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 28.36 | 28.72 |
| KXG23228 | Sorghum | plastid | 28.11 | 25.45 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 32.09 | 25.0 |
| KXG28193 | Sorghum | cytosol | 16.92 | 24.29 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8066642 | UniProt:C5YV73 | EnsemblPlants:EES17917 | ProteinID:EES17917 |
| ProteinID:EES17917.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 |
| EnsemblPlantsGene:SORBI_3009G086800 | SUPFAM:SSF101941 | UniParc:UPI0001A88AAD | RefSeq:XP_002439487.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:14688180..14690170
Molecular Weight (calculated)
44132.2 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.373
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQQQPQQE EMNIVRVGGL DLLPGFRFHP NDFEIVNDYL MKKVHNRDFI CAIGEVDLNK TEPWDLPREA KMNEKEWYFF SKKDRKYPTG LRANRATEAG
101: YWKATGKDKE VYKPSKGEGV VLLIGMKKTL VFYEGRAPRG NKTNWVMHEY RLEGNSRVPS PTSASSSTTN ATIAIKGSAF VSKDEWVICR VFHKTTGIRK
201: TTIPAYQVAM PDAEIDQNQN NTLAIPVPMQ LQLPQSMPMP MQCPILPDFS MDPVPPYYPN SNTGIGMPLV MPPMAGIGGT GGLQINGSLF NNPMVVPPSM
301: NFYHQMGMGS SAGQMGTGEP IGQMDMGALV GQMGIGPVAQ MDMGAASASG FNVAMSESRP SSMVLQKDEQ ANAAEITSMM SVSGPGSATT TIEIDGIWKY
401: KY
101: YWKATGKDKE VYKPSKGEGV VLLIGMKKTL VFYEGRAPRG NKTNWVMHEY RLEGNSRVPS PTSASSSTTN ATIAIKGSAF VSKDEWVICR VFHKTTGIRK
201: TTIPAYQVAM PDAEIDQNQN NTLAIPVPMQ LQLPQSMPMP MQCPILPDFS MDPVPPYYPN SNTGIGMPLV MPPMAGIGGT GGLQINGSLF NNPMVVPPSM
301: NFYHQMGMGS SAGQMGTGEP IGQMDMGALV GQMGIGPVAQ MDMGAASASG FNVAMSESRP SSMVLQKDEQ ANAAEITSMM SVSGPGSATT TIEIDGIWKY
401: KY
001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.