Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97445 | Canola | cytosol | 99.11 | 99.11 |
| Bra010362.1-P | Field mustard | nucleus | 99.7 | 96.54 |
| CDY51707 | Canola | cytosol | 41.67 | 88.61 |
| CDX92881 | Canola | cytosol | 41.37 | 85.28 |
| CDY35197 | Canola | nucleus | 81.55 | 82.04 |
| CDY38380 | Canola | nucleus | 82.14 | 80.23 |
| AT4G28530.1 | Thale cress | nucleus | 81.55 | 77.84 |
| CDX92880 | Canola | nucleus | 43.45 | 73.74 |
| CDY51708 | Canola | nucleus | 43.45 | 73.37 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 46.73 | 53.4 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 46.73 | 53.04 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 30.06 | 52.88 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 46.43 | 52.7 |
| Solyc09g025310.2.1 | Tomato | nucleus | 42.26 | 52.59 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 42.26 | 51.26 |
| GSMUA_Achr11P... | Banana | nucleus | 37.5 | 48.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.77 | 47.24 |
| CDY29982 | Canola | cytosol | 24.11 | 47.09 |
| PGSC0003DMT400051915 | Potato | cytosol | 39.58 | 46.83 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 40.18 | 46.39 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 37.5 | 46.15 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 37.5 | 46.15 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 37.5 | 45.32 |
| Os04t0515900-01 | Rice | nucleus | 37.5 | 45.32 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 37.2 | 45.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.23 | 44.75 |
| GSMUA_Achr11P... | Banana | nucleus | 36.61 | 44.24 |
| CDY68680 | Canola | nucleus | 27.38 | 43.81 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 31.85 | 43.67 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 36.61 | 43.62 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 38.1 | 43.1 |
| CDY70041 | Canola | nucleus | 27.38 | 42.99 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 36.9 | 42.32 |
| KXG26719 | Sorghum | nucleus | 36.31 | 42.07 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 36.9 | 41.75 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 36.61 | 41.55 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 37.8 | 41.5 |
| EES05451 | Sorghum | nucleus | 37.2 | 41.39 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 36.61 | 41.28 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 38.1 | 41.16 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 37.8 | 41.1 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 36.9 | 40.92 |
| EES07725 | Sorghum | cytosol | 36.9 | 40.92 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 35.71 | 40.82 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 37.5 | 40.51 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 37.5 | 40.38 |
| Os10t0477600-01 | Rice | nucleus | 38.69 | 40.12 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 36.9 | 40.0 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 36.31 | 39.74 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 36.9 | 39.37 |
| Os03t0109000-01 | Rice | nucleus | 33.33 | 37.71 |
| CDY51910 | Canola | nucleus | 27.98 | 37.6 |
| Os02t0810900-01 | Rice | nucleus | 36.9 | 37.46 |
| CDY23558 | Canola | nucleus | 29.17 | 35.77 |
| CDY60115 | Canola | nucleus | 29.46 | 35.48 |
| CDX82566 | Canola | nucleus | 28.57 | 34.66 |
| CDY64672 | Canola | nucleus | 28.57 | 33.92 |
| CDY69936 | Canola | nucleus | 27.98 | 33.22 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 25.6 | 33.2 |
| CDY18519 | Canola | nucleus | 29.76 | 33.11 |
| CDX75966 | Canola | nucleus | 27.68 | 33.1 |
| CDY69369 | Canola | nucleus | 29.76 | 32.89 |
| CDX67433 | Canola | nucleus | 27.68 | 32.29 |
| CDY37008 | Canola | nucleus | 27.38 | 31.94 |
| CDY67593 | Canola | nucleus | 29.17 | 31.92 |
| CDY51941 | Canola | nucleus | 28.27 | 31.77 |
| CDY42401 | Canola | nucleus | 30.06 | 31.46 |
| CDY10515 | Canola | nucleus | 30.06 | 31.37 |
| CDY30258 | Canola | nucleus | 26.79 | 31.14 |
| CDY14030 | Canola | nucleus | 29.17 | 31.11 |
| CDX74442 | Canola | nucleus | 26.49 | 30.8 |
| CDY20314 | Canola | nucleus | 28.57 | 30.28 |
| CDY40775 | Canola | nucleus | 29.17 | 30.25 |
| CDY56940 | Canola | nucleus | 29.17 | 29.97 |
| CDX85242 | Canola | cytosol | 28.57 | 29.91 |
| CDX76817 | Canola | nucleus | 27.98 | 29.65 |
| CDY34773 | Canola | nucleus | 27.98 | 29.65 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 27.08 | 29.45 |
| CDY42875 | Canola | nucleus | 27.98 | 28.92 |
| CDY51238 | Canola | nucleus | 28.27 | 28.19 |
| CDX70804 | Canola | nucleus | 28.27 | 28.19 |
| CDY45986 | Canola | cytosol | 26.79 | 28.12 |
| CDY20411 | Canola | cytosol | 26.79 | 28.04 |
| CDX87602 | Canola | cytosol | 27.68 | 27.76 |
| CDY20103 | Canola | nucleus | 25.0 | 27.72 |
| CDX88273 | Canola | cytosol | 27.68 | 27.6 |
| CDY53250 | Canola | nucleus | 27.38 | 27.38 |
| CDY32316 | Canola | nucleus | 25.0 | 27.36 |
| CDY02636 | Canola | nucleus | 27.38 | 27.3 |
| CDX75813 | Canola | nucleus | 25.0 | 27.27 |
| CDX82444 | Canola | nucleus | 25.0 | 27.18 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 27.38 | 26.82 |
| CDY42901 | Canola | nucleus | 26.79 | 26.16 |
| CDY28805 | Canola | nucleus | 28.27 | 25.89 |
| CDX96262 | Canola | nucleus | 28.27 | 25.89 |
| CDX98529 | Canola | mitochondrion | 20.54 | 25.27 |
| CDX99695 | Canola | mitochondrion | 20.54 | 25.27 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 26.79 | 24.19 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FM93 | UniProt:A0A078FM93 | EnsemblPlants:CDY14236 | ProteinID:CDY14236 |
| ProteinID:CDY14236.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00078811001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EEA33C | SEG:seg | : | : |
Description
BnaA08g13670DBnaA08g13670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM93]
Coordinates
chrLK032041:+:398076..400833
Molecular Weight (calculated)
38670.5 Da
IEP (calculated)
7.051
GRAVY (calculated)
-0.691
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKDIGSTL PPGFRFHPSD EELVCHYLCN KIRAKSLHCN DATDLVEIDL HICEPWQLPD VAKLNAKEWY FFSFRDRKYC TGYRTNRATV SGYWKATGKD
101: RTVIDPRTRQ LVGMRKTLVF YRNRAPHGIK TTWIMHEFRL ECPNMLPKED WVLCRVFNKG RDLSLQDNNN DHLTRRFAVN GAPDLNYAPN YNNQLHPLLS
201: SSPSTTIDPL HHLDQWGQLM KQPSRTTDHP YHHHCKHQTI ACGWEQMMGS MSSSSTHGHD HESLLNLLYA DNNNNINVTD DQYIQNYEKI LFPSDSTSLD
301: HDKICMGTSS DGGMVSNPRM ECGGLSFETD NPLSFH
101: RTVIDPRTRQ LVGMRKTLVF YRNRAPHGIK TTWIMHEFRL ECPNMLPKED WVLCRVFNKG RDLSLQDNNN DHLTRRFAVN GAPDLNYAPN YNNQLHPLLS
201: SSPSTTIDPL HHLDQWGQLM KQPSRTTDHP YHHHCKHQTI ACGWEQMMGS MSSSSTHGHD HESLLNLLYA DNNNNINVTD DQYIQNYEKI LFPSDSTSLD
301: HDKICMGTSS DGGMVSNPRM ECGGLSFETD NPLSFH
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.