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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70041 Canola nucleus 100.0 98.13
CDX75966 Canola nucleus 92.38 69.04
Bra022319.1-P Field mustard nucleus 99.05 67.75
CDY67593 Canola nucleus 98.1 67.1
CDY18519 Canola nucleus 94.29 65.56
CDY51941 Canola nucleus 92.38 64.88
CDY69369 Canola nucleus 92.86 64.14
AT3G18400.1 Thale cress nucleus 95.24 63.69
CDY29982 Canola cytosol 46.67 56.98
GSMUA_Achr9P00570_001 Banana nucleus 43.33 54.17
CDY51707 Canola cytosol 39.05 51.9
CDX92881 Canola cytosol 38.57 49.69
VIT_17s0000g03660.t01 Wine grape nucleus 76.67 49.24
KRH41635 Soybean nucleus 72.86 48.88
KRH48487 Soybean nucleus 75.24 48.77
KRH60340 Soybean nucleus 72.86 47.66
KRH39185 Soybean nucleus 74.76 47.43
GSMUA_Achr8P18420_001 Banana nucleus 63.33 46.18
Solyc12g036480.1.1 Tomato nucleus 70.95 45.71
PGSC0003DMT400013753 Potato nucleus 71.9 45.07
TraesCS4D01G071200.1 Wheat cytosol, mitochondrion, nucleus 63.33 44.48
HORVU4Hr1G012030.1 Barley cytosol, mitochondrion, nucleus 63.33 44.48
TraesCS4B01G072400.1 Wheat cytosol, mitochondrion, nucleus 62.86 44.15
CDY66026 Canola cytoskeleton, cytosol, nucleus 53.81 43.63
TraesCS4A01G242700.1 Wheat cytosol, mitochondrion, nucleus 61.9 43.48
PGSC0003DMT400074048 Potato nucleus 62.38 42.95
CDY69936 Canola nucleus 56.67 42.05
CDY64672 Canola nucleus 55.71 41.34
CDX67433 Canola nucleus 55.71 40.62
GSMUA_Achr10P... Banana nucleus 62.86 40.24
CDY37008 Canola nucleus 54.76 39.93
Zm00001d013717_P001 Maize nucleus 62.38 39.7
Zm00001d033308_P001 Maize nucleus 61.43 39.57
CDY30258 Canola nucleus 53.81 39.1
CDX74442 Canola nucleus 53.81 39.1
EER93792 Sorghum cytosol, mitochondrion, nucleus 62.86 38.71
Os03t0624600-01 Rice cytosol, mitochondrion, nucleus 59.52 38.7
CDY20314 Canola nucleus 57.62 38.17
CDY34773 Canola nucleus 57.14 37.85
CDX76817 Canola nucleus 57.14 37.85
CDY14030 Canola nucleus 56.19 37.46
CDY20103 Canola nucleus 53.81 37.29
CDX75813 Canola nucleus 54.29 37.01
CDY56940 Canola nucleus 57.62 37.0
CDX82444 Canola nucleus 54.29 36.89
CDY32316 Canola nucleus 53.81 36.81
CDY42875 Canola nucleus 56.67 36.62
CDY40775 Canola nucleus 56.19 36.42
CDY51910 Canola nucleus 43.33 36.4
CDY20411 Canola cytosol 54.76 35.83
CDY45986 Canola cytosol 54.29 35.62
CDX86391 Canola cytoskeleton, cytosol, nucleus 52.38 35.6
CDY53250 Canola nucleus 55.71 34.82
CDY02636 Canola nucleus 55.71 34.72
CDX85242 Canola cytosol 52.86 34.58
CDX96262 Canola nucleus 59.52 34.06
CDY28805 Canola nucleus 59.52 34.06
CDX70804 Canola nucleus 54.29 33.83
CDY51238 Canola nucleus 54.29 33.83
CDX87602 Canola cytosol 53.81 33.73
CDX88273 Canola cytosol 53.81 33.53
CDX82566 Canola nucleus 43.33 32.85
CDY50879 Canola cytoskeleton, cytosol, nucleus 53.33 32.65
CDY60115 Canola nucleus 43.33 32.62
CDY23558 Canola nucleus 42.38 32.48
CDY42901 Canola nucleus 52.38 31.98
CDX99695 Canola mitochondrion 40.48 31.14
CDX98529 Canola mitochondrion 40.48 31.14
CDY20001 Canola cytoskeleton, cytosol, nucleus 53.33 30.11
CDY42401 Canola nucleus 45.24 29.59
CDY10515 Canola nucleus 44.76 29.19
CDY35197 Canola nucleus 44.76 28.14
CDY38380 Canola nucleus 45.24 27.62
CDX97445 Canola cytosol 43.81 27.38
CDY14236 Canola cytosol 43.81 27.38
Solyc06g069100.1.1 Tomato nucleus 61.43 25.96
CDX92880 Canola nucleus 7.14 7.58
CDY51708 Canola nucleus 7.14 7.54
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078JQF7UniProt:A0A078JQF7EnsemblPlants:CDY68680ProteinID:CDY68680
ProteinID:CDY68680.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00077057001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR31744
PANTHER:PTHR31744:SF3SUPFAM:SSF101941UniParc:UPI0004EED88E:::
Description
BnaCnng60050DBnaCnng60050D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQF7]
Coordinates
chrLK037791:-:2..2536
Molecular Weight (calculated)
23999.3 Da
IEP (calculated)
7.382
GRAVY (calculated)
-0.782
Length
210 amino acids
Sequence
(BLAST)
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDT GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ENKQPFTPAK EEWVVCRVFE KSTAIKKPQE QQPQSSFGSP CDANSSMANE FEDIELPNLN SNSSTFDNIT
201: SAAGLNMNMN
Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.