Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001586.1-P | Field mustard | nucleus | 98.7 | 98.38 |
| CDX82444 | Canola | nucleus | 97.73 | 97.41 |
| CDY20103 | Canola | nucleus | 83.77 | 85.15 |
| CDY32316 | Canola | nucleus | 84.74 | 85.02 |
| AT3G15170.1 | Thale cress | nucleus | 82.79 | 82.26 |
| CDX99695 | Canola | mitochondrion | 70.45 | 79.49 |
| CDX98529 | Canola | mitochondrion | 70.45 | 79.49 |
| CDY29982 | Canola | cytosol | 31.82 | 56.98 |
| CDY68680 | Canola | nucleus | 37.01 | 54.29 |
| CDY70041 | Canola | nucleus | 37.01 | 53.27 |
| CDY51707 | Canola | cytosol | 24.35 | 47.47 |
| CDY69936 | Canola | nucleus | 43.18 | 47.0 |
| CDY64672 | Canola | nucleus | 43.18 | 47.0 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 38.31 | 45.56 |
| KRH27280 | Soybean | nucleus | 50.32 | 45.19 |
| KRH22042 | Soybean | nucleus | 51.3 | 44.89 |
| CDX92881 | Canola | cytosol | 23.7 | 44.79 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 51.3 | 43.53 |
| CDY14030 | Canola | nucleus | 44.48 | 43.49 |
| CDX75966 | Canola | nucleus | 39.29 | 43.06 |
| CDX67433 | Canola | nucleus | 39.94 | 42.71 |
| Solyc07g062840.2.1 | Tomato | nucleus | 48.7 | 42.61 |
| CDX74442 | Canola | nucleus | 39.29 | 41.87 |
| CDY30258 | Canola | nucleus | 39.29 | 41.87 |
| CDY37008 | Canola | nucleus | 38.96 | 41.67 |
| CDY40775 | Canola | nucleus | 43.83 | 41.67 |
| CDY56940 | Canola | nucleus | 44.16 | 41.59 |
| GSMUA_Achr10P... | Banana | nucleus | 44.81 | 41.57 |
| CDY28805 | Canola | nucleus | 49.35 | 41.42 |
| CDX96262 | Canola | nucleus | 49.35 | 41.42 |
| CDY18519 | Canola | nucleus | 40.58 | 41.39 |
| KRH26232 | Soybean | nucleus | 49.03 | 41.26 |
| CDY51941 | Canola | nucleus | 39.94 | 41.14 |
| CDY42875 | Canola | nucleus | 43.18 | 40.92 |
| CDY69369 | Canola | nucleus | 40.26 | 40.79 |
| CDY67593 | Canola | nucleus | 40.58 | 40.72 |
| KRH55187 | Soybean | nucleus | 49.35 | 40.53 |
| CDY51910 | Canola | nucleus | 31.82 | 39.2 |
| Zm00001d035266_P001 | Maize | nucleus | 45.13 | 38.94 |
| CDY20314 | Canola | nucleus | 39.61 | 38.49 |
| CDX76817 | Canola | nucleus | 39.29 | 38.17 |
| CDY34773 | Canola | nucleus | 39.29 | 38.17 |
| PGSC0003DMT400032280 | Potato | nucleus | 35.06 | 37.63 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 37.66 | 37.54 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 45.45 | 37.53 |
| TraesCS7D01G342300.1 | Wheat | nucleus | 43.83 | 37.29 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 43.51 | 37.02 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 43.51 | 36.91 |
| CDX85242 | Canola | cytosol | 38.31 | 36.76 |
| CDX82566 | Canola | nucleus | 32.79 | 36.46 |
| CDY02636 | Canola | nucleus | 39.29 | 35.91 |
| Zm00001d041791_P001 | Maize | nucleus | 42.86 | 35.87 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.94 | 35.86 |
| CDY60115 | Canola | nucleus | 32.47 | 35.84 |
| CDY23558 | Canola | nucleus | 31.82 | 35.77 |
| CDY53250 | Canola | nucleus | 38.96 | 35.71 |
| CDY42901 | Canola | nucleus | 39.29 | 35.17 |
| CDX70804 | Canola | nucleus | 37.99 | 34.72 |
| CDY51238 | Canola | nucleus | 37.99 | 34.72 |
| CDY45986 | Canola | cytosol | 35.71 | 34.38 |
| CDY20411 | Canola | cytosol | 35.71 | 34.27 |
| CDX87602 | Canola | cytosol | 36.69 | 33.73 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 42.86 | 33.67 |
| CDX88273 | Canola | cytosol | 36.36 | 33.23 |
| CDY10515 | Canola | nucleus | 34.74 | 33.23 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 39.29 | 32.53 |
| CDY42401 | Canola | nucleus | 33.77 | 32.4 |
| KXG23228 | Sorghum | plastid | 45.78 | 31.76 |
| CDY35197 | Canola | nucleus | 27.27 | 25.15 |
| CDY14236 | Canola | cytosol | 27.27 | 25.0 |
| CDX97445 | Canola | cytosol | 27.27 | 25.0 |
| CDY38380 | Canola | nucleus | 27.6 | 24.71 |
| CDX92880 | Canola | nucleus | 4.55 | 7.07 |
| CDY51708 | Canola | nucleus | 4.55 | 7.04 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CL69 | EnsemblPlants:CDX75813 | ProteinID:CDX75813 | ProteinID:CDX75813.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00123768001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF22 | SUPFAM:SSF101941 | UniParc:UPI0004EE7646 | SEG:seg | : | : |
Description
BnaC03g38960D
Coordinates
chrLK031805:+:882099..883640
Molecular Weight (calculated)
34112.3 Da
IEP (calculated)
8.181
GRAVY (calculated)
-0.379
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDVFNGWE RSRYEDETVM PPGFRFHPTD EELITYYLLK KVLDSSFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTNSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYITSSA KDEWVLSKVC LKSSVVSRET KLISSSGGVN CSSSSASAGS
201: LIAPMIDAYA TEHVSCFSNT SAAHADASFP PTYLPAPPPP SLPRQPRRFG DDVAFGQFMD VGASGQFSID AAFLPNLPSL PPTVFTAPSQ PFGVYGGGSA
301: VSSWPFAL
101: WKATGKDREI KSSKTNSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYITSSA KDEWVLSKVC LKSSVVSRET KLISSSGGVN CSSSSASAGS
201: LIAPMIDAYA TEHVSCFSNT SAAHADASFP PTYLPAPPPP SLPRQPRRFG DDVAFGQFMD VGASGQFSID AAFLPNLPSL PPTVFTAPSQ PFGVYGGGSA
301: VSSWPFAL
001: MDVDVFNGWG RPRFEDESLM PPGFRFHPTD EELITYYLLK KVLDSNFSCA AISQVDLNKS EPWELPEKAK MGEKEWYFFT LRDRKYPTGL RTNRATEAGY
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
101: WKATGKDREI KSSKTKSLLG MKKTLVFYKG RAPKGEKSCW VMHEYRLDGK FSYHYISSSA KDEWVLCKVC LKSGVVSRET NLISSSSSSA VTGEFSSAGS
201: AIAPIINTFA TEHVSCFSNN SAAHTDASFH TFLPAPPPSL PPRQPRHVGD GVAFGQFLDL GSSGQIDFDA AAAAFFPNLP SLPPTVLPPP PSFAMYGGGS
301: PAVSVWPFTL
Arabidopsis Description
NAC054CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.